Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1121 ATGAAGAAAGCGAGCACAGCTACTTTTCCATCAAAACCCTTATGGGTTCTCCCCTATCGAACCCAAAGCCTCCCTGAACTTTACACATTGGGAAGGAAATTGGGTCAAGGTCAATTTGGCACAACTTTCCTCTGCACAGAAAAGTCCACTGGTCGTACCTATGCCTGCAAGTCAATCCCTAAGCGCAAGCTAATCTGTCAAGAGGATTACGACGACGTTTGGAGGGAGATTCAGATCATACACCATTTATCTGAGAATCCCAACGTTGTCAGAATCCATGGCACTTACGAGGACTTCTCCTCTGTTCACTTGGTCATGGAGCTCTGCCAAGGTGGAGAGCTGTTCGACAGGATAGTGCAGAAAGGGCATTTCAGTGAGAGGCAAGCAGCTACGTTGATCAGGATCATTGTTGAGGTTGTCCAAGCTTTTCATTCTCTTGGGGTCATGCATAGAGACCTCAAGCCAGAGAACTTCTTGTTCGATAGCGTTGAAGAGGATGCTAAACTTAAAGTGACTGATTTCGTATTGTCTGTTTTCTACAAGCCAGGTGAAACCTTTTCTGATGTTGTTGGGAGCTCTTATTATGTCGCACCAGAGGTGTTACGCAAGCATTATGGACCCCAGTCAGATGTGTGGAGTGCTGGGGTTATTTTGTACATCTTATTAAGTGGGGTGCCACCTTTTTGGGCTGTAACTACTGATATACAACATGCAGTACTAAAGTGGTTTGTTGTGTCAGGCCACCCATGGATTGTTGATGACAATATTGCACCTGATAAACCCCTTGACTCTGCTGTTTTATCACGCCTGAAACAGTTCTCTGCAATGATAAGCTTAAAAAGATGGCTTTACGTTGAAAGCATTTTCAAAATGCATTTACTGGGAACATTTCAGCTAGACTAGAGGCTCTCTGAGGAAGAAATTGGTGGACTGAAGGAGTTATTCAAGATGATTGACACAGACAACAGCGGAACCATAACTTTTGATGAGTTAAAAGATGGTTTAAAGCTAGTTGGGTCTGAACTCATGGAGTCTGAAATCGGGGATCTTATGGAAGCGGTAAGAGAGGAAAATCTGTTGTCAGCTTTCTCATATTTCGATAAATATGGTAGTGGTTACATAACCATTGATGAGATTCAACAAGCCTGCAAGGAATTTGGTTTAGGCGATGTCCATATCGATGAAATGATCAAGGAAATTGATCAAGACAATTGGGTGCGTAATTTGCATCGGCCATTGCCTGAATTGGGTCAGCTTTTTGCTTTCGCTAACGGCTAA 1278 0.4335 MKKASTATFPSKPLWVLPYRTQSLPELYTLGRKLGQGQFGTTFLCTEKSTGRTYACKSIPKRKLICQEDYDDVWREIQIIHHLSENPNVVRIHGTYEDFSSVHLVMELCQGGELFDRIVQKGHFSERQAATLIRIIVEVVQAFHSLGVMHRDLKPENFLFDSVEEDAKLKVTDFVLSVFYKPGETFSDVVGSSYYVAPEVLRKHYGPQSDVWSAGVILYILLSGVPPFWAVTTDIQHAVLKWFVVSGHPWIVDDNIAPDKPLDSAVLSRLKQFSAMISLKRWLYVESIFKMHLLGTFQLDXRLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKLVGSELMESEIGDLMEAVREENLLSAFSYFDKYGSGYITIDEIQQACKEFGLGDVHIDEMIKEIDQDNWVRNLHRPLPELGQLFAFANG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1121 425 ProSitePatterns EF-hand calcium-binding domain. 319 331 IPR018247 -
Lele20g1121 425 ProSiteProfiles EF-hand calcium-binding domain profile. 354 389 IPR002048 GO:0005509
Lele20g1121 425 Pfam EF hand 311 336 IPR002048 GO:0005509
Lele20g1121 425 SMART efh_1 310 338 IPR002048 GO:0005509
Lele20g1121 425 SMART efh_1 358 386 IPR002048 GO:0005509
Lele20g1121 425 CDD STKc_CAMK 28 230 - -
Lele20g1121 425 Pfam EF-hand domain 359 386 IPR002048 GO:0005509
Lele20g1121 425 ProSiteProfiles EF-hand calcium-binding domain profile. 306 341 IPR002048 GO:0005509
Lele20g1121 425 SUPERFAMILY EF-hand 303 404 IPR011992 -
Lele20g1121 425 PANTHER SERINE/THREONINE-PROTEIN KINASE 247 404 - -
Lele20g1121 425 Gene3D Transferase(Phosphotransferase) domain 1 114 280 - -
Lele20g1121 425 SMART serkin_6 28 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1121 425 Gene3D Phosphorylase Kinase; domain 1 30 113 - -
Lele20g1121 425 Gene3D - 357 405 - -
Lele20g1121 425 Gene3D - 290 356 - -
Lele20g1121 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Lele20g1121 425 ProSiteProfiles Protein kinase domain profile. 28 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1121 425 SUPERFAMILY Protein kinase-like (PK-like) 28 259 IPR011009 -
Lele20g1121 425 ProSitePatterns Protein kinases ATP-binding region signature. 34 57 IPR017441 GO:0005524
Lele20g1121 425 CDD EFh 311 382 IPR002048 GO:0005509
Lele20g1121 425 FunFam Calcium-dependent protein kinase 1 30 113 - -
Lele20g1121 425 Pfam Protein kinase domain 28 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1121 425 FunFam Maternal embryonic leucine zipper kinase 20 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1121 Lele-ChrLele20 16600784 16604448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1121 6 404 EF-hand Containing Proteins AT1G35670 61.874 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele20g1121 Pkinase 4.7e-61 CL0016