Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1104 ATGGAAAAGATGAATTTTATGAAGAATGGAGTTTGCAGATTGCCTCCTGGATTTAGGTTCCAGCCAACAGAGGAAGAACTTGTGTTTCAGTATTTGAAATGCAAGGTTCTTTCATGTCCACTTCCTACATCGATCATTCCTGAAGTCAATGTCTGCAACTACGATCCTCGGGATTTGCCAGGGAATTGTGAAGAGCTAGAGAGGTACTTCTTCAGTTACAAGGAAGCGAAATACAGAAATGGTAATCGCATGAACCGAAAAACCAAGTCTGGGTATTGGAAGGCAACTGGTTCAGACAAGAAAATAATATCATCTCCAACATGTAAAAACAATAATTATATTTTTTCTGGGGTGAGAAAAACCCTAGTTTTTTACCAAGGGAAGGCTCCAAACAGCTCTAGAACTAACTGGGTCATGCACGAATATCGCCTTGTCATTGCAGAAACCAGTGCTCCCAACTCAACCCACCCGAGTCATGGGAAGGAGGTAGGAGATTGGGTTCTGTGTCGGATAAGCATGAAGTCGAGAAGAGAGGGTGGTGATGTAGGAGAGAGAAGATTCTTTGATTTTATGAGCGTACGAAGGGTTGCTGCAGAAGAACAACGTTATTCTGACACGTCATCGTCTTGTTCAAGTTCAAGTGACATTACAGAGGTTTGTTCAGGCGAAGCAGATCATGAAGCAACAAGTGGCTATAGCTATACTCATAAGATCGAACCCCTTATAGATAGATATGTCTGA 741 0.4211 MEKMNFMKNGVCRLPPGFRFQPTEEELVFQYLKCKVLSCPLPTSIIPEVNVCNYDPRDLPGNCEELERYFFSYKEAKYRNGNRMNRKTKSGYWKATGSDKKIISSPTCKNNNYIFSGVRKTLVFYQGKAPNSSRTNWVMHEYRLVIAETSAPNSTHPSHGKEVGDWVLCRISMKSRREGGDVGERRFFDFMSVRRVAAEEQRYSDTSSSCSSSSDITEVCSGEADHEATSGYSYTHKIEPLIDRYV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1104 246 ProSiteProfiles NAC domain profile. 14 174 IPR003441 GO:0003677|GO:0006355
Lele20g1104 246 Pfam No apical meristem (NAM) protein 15 144 IPR003441 GO:0003677|GO:0006355
Lele20g1104 246 SUPERFAMILY NAC domain 9 174 IPR036093 GO:0003677|GO:0006355
Lele20g1104 246 Gene3D NAC domain 23 179 IPR036093 GO:0003677|GO:0006355
Lele20g1104 246 PANTHER NAC TRANSCRIPTION FACTOR 56 14 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1104 Lele-ChrLele20 16511894 16512818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1104 1 176 NAC Transcription Factor Family AT5G13180 58.523 1.71e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele20g1104 NAM 4.1e-32 No_clan