Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1095 ATGGATGACGGCCACCAGCGTGAAAACGGCAGACAGAAGGTGGATTACTATAGAGGAGCTCATTCCCTGTGGAATATCGCTACCCAGCATCAGGTAAAGGAACCAAATGCCCTGGTTATGAATAAGAAAATTATGTCTGTTATTGCTGAGAGAGAAGCTGCAATTCGAGAACGGAATGCGGCTTTATCTGAAAAGAATGAAGCGTTGGCTGCTCGAGACGATGCCCTTCGGCAGAGGGATGAAGCACTTCTGCAGAGGGATAATGCCTTGATGGAACGGGATAATGCTCTCGCTGCCCTTCAAATCCAGGATAATGCTACCTACTTCTCGTTGGGTTGTGCCACTCAACGTGGATCAAAGCGGATGCCCCATTCCTCGAATCATTTTGGTCAAATCGCAGAAGGTGCTTATAGAACAAAGGATTTGACCACAACCGATGCCTTCCCTGTGACTATTGTAGCTTCTGAAGCGGGCAAGTATAATCAGGCTAATAAGAGAACAAGGGAGAACAAGGCAGATTCTTCGAAGGCATCAAAACCACTAGGTAAAGGGAAAAAAGTGAGTGAGGACTTAAATAGGCGGGCTCCTTCTGAAGTGACAAAGATCAAATCTGAATGGGATAAACAAGATGTTGGATTGAATTTGATTATATTTGATGAAAATATCATGCTAGCCCCTGTTTGCACATGTACCGGAGCACCACGGCAATGCTACAAATGGGGTAATGGTGGGTGGCAGTCATCTTGTTGTACCACCACCTTGTCCATGTATCCATTACCGCAGCTTCCAAACAAGCGACATGCGCGAGTCGGAGGGCGAAAGATGAGTGGAAGTGTCTTTACAAGACTTCTTAGCAGGGTGGCCGCACAAGGCCGTGATTTATCTATACCATTAGATCTCAAGGACTATTGGGCCAGGCATGGAACAAATCGCTACATCACAATCAAGTAA 951 0.4616 MDDGHQRENGRQKVDYYRGAHSLWNIATQHQVKEPNALVMNKKIMSVIAEREAAIRERNAALSEKNEALAARDDALRQRDEALLQRDNALMERDNALAALQIQDNATYFSLGCATQRGSKRMPHSSNHFGQIAEGAYRTKDLTTTDAFPVTIVASEAGKYNQANKRTRENKADSSKASKPLGKGKKVSEDLNRRAPSEVTKIKSEWDKQDVGLNLIIFDENIMLAPVCTCTGAPRQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARVGGRKMSGSVFTRLLSRVAAQGRDLSIPLDLKDYWARHGTNRYITIK 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1095 316 PANTHER - 1 316 IPR010409 -
Lele20g1095 316 MobiDBLite consensus disorder prediction 161 196 - -
Lele20g1095 316 MobiDBLite consensus disorder prediction 162 196 - -
Lele20g1095 316 Pfam GAGA binding protein-like family 1 316 IPR010409 -
Lele20g1095 316 SMART GAGA_bind_2 1 316 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1095 Lele-ChrLele20 16478327 16479363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1095 1 316 BBR or BPC Transcription factor family AT2G21240 56.740 9.55e-130 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele20g1095 GAGA_bind 2.2e-96 No_clan