Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1086 ATGGACTTGAGAAGATGGAACACCATAGCTATGGCTCTGGTGTTACTTCACTTGAGCTTAATTATGCCTGTCTTCTCTATCTCGTCTCACCCAGATAGGATCCTACGGCTTCCTGGACAACCCCCCCACGTACGTTTCCAACACTACTCAGGATACGTCACAGTTGATGACAAGAAACATAAAGCTCTGTTCTACTATTTTGTTGAATCTGAAACTGATCCTGCTTCTAAGCCTCTTGCTCTCTGGCTCAATGGAGGACCTGGCTGTTCTTCACTTGGTGTTGGAGCATTCTCTGAAAATGGACCCTTTAGACCAAATGGTGATGTTTTGATTCAAAATGATTACAGCTGGAACAAAGAGGCAAACATGCTATATTTGGAGACACCAATTGGAGTGGGATTTTCTTATGCTAAAGACCGATCTTATATGATAGTGGACGATAAGGAAACTGCCAGGGACAATCTCATGTTTCTGAAACTCTGGTTCAACAAGTTCCCTCAATACAGGCAACGAGATTTGTATCTTACGGGTGAAAGTTATGCAGGGCATTATGTTCCTCAACTTGCAAAGCTCATGATTGACTTCAACAAGAAGGAAAAGATCTTTAACGTTAAAGGCATAGCTTTGGGTAATCCAGTTCTAGAATACGCCACGGACTTCAACTCAAGAGCCGAGTTCTTCTGGTCTCATGGATTAATATCAGATTCAACCTACAAAATGTTCACCTCAATGTGTAATTATTCTCGGTACGTTAGTGAATACTACAGAGACTCAGTTTCGCCTCTTTGTTCAAAGGTTATGAGCCAAGTAAGCACAGAAACGAGTAAATTCGTGGACAAATATGATGTAACGCTTGATGTCTGCATTTCCTCAGTTCTTTCACAGTCCAAGGCCATTTGTCCTCAAACACAACAAAAAGGCGAGAGGATAGACGTATGTGTTGATGACAAAGTTATAAGTTACTTGAACCGAAGAGATGTTCAAGAGGCACTTCACGCAAAACTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAATGTTCTGGACTACGATATGCTCAATCTTGAAGTACCTACACTTCCTATTGTTGGATCAATAGTCAAAGCTGGAGTTCATGTCTTAATTTACAGCGGAGATCAAGATTCTGTAATTCCACTAACTGGTAGCCGTACATTGGTTCAGAAATTAGCAAGGCAATTAGCGCTGAACACTACTGTTCCTTACAGAGTATGGTTCGAAGGCCGACAGGTTGGTGGTTGGACTCAAGTTTATGGGAATAATAAGCTTTCGTTTGCGACCATAAGAGGTGCTTCCCATGAAGCTCCTTTCTCGCAGCCTGAGAGATCTCTAACGTTGTTTAAATCATTCTTGCAAGGCAGGCCTCTACCAGCTGATATTTTCTGA 1404 0.4217 MDLRRWNTIAMALVLLHLSLIMPVFSISSHPDRILRLPGQPPHVRFQHYSGYVTVDDKKHKALFYYFVESETDPASKPLALWLNGGPGCSSLGVGAFSENGPFRPNGDVLIQNDYSWNKEANMLYLETPIGVGFSYAKDRSYMIVDDKETARDNLMFLKLWFNKFPQYRQRDLYLTGESYAGHYVPQLAKLMIDFNKKEKIFNVKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYKMFTSMCNYSRYVSEYYRDSVSPLCSKVMSQVSTETSKFVDKYDVTLDVCISSVLSQSKAICPQTQQKGERIDVCVDDKVISYLNRRDVQEALHAKLVGVRKWDVCSNVLDYDMLNLEVPTLPIVGSIVKAGVHVLIYSGDQDSVIPLTGSRTLVQKLARQLALNTTVPYRVWFEGRQVGGWTQVYGNNKLSFATIRGASHEAPFSQPERSLTLFKSFLQGRPLPADIF 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1086 467 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Lele20g1086 467 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Lele20g1086 467 Pfam Serine carboxypeptidase 38 459 IPR001563 GO:0004185|GO:0006508
Lele20g1086 467 Gene3D - 359 459 - -
Lele20g1086 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Lele20g1086 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Lele20g1086 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Lele20g1086 467 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Lele20g1086 467 FunFam Carboxypeptidase 359 459 - -
Lele20g1086 467 FunFam Carboxypeptidase 27 463 - -
Lele20g1086 467 Gene3D alpha/beta hydrolase 28 299 IPR029058 -
Lele20g1086 467 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 446 IPR001563 GO:0004185|GO:0006508
Lele20g1086 467 SUPERFAMILY alpha/beta-Hydrolases 34 463 IPR029058 -
Lele20g1086 467 Gene3D - 313 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1086 Lele-ChrLele20 16426701 16429282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1086 321 462 Calmodulin-binding Proteins AT2G22960 28.873 6.74e-15 71.2