Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1077 ATGGCACTGGAACCAGAGAAAATATACGAAGATGCTACATGTCCGCCTGCTTCAGCTGAAGACCTTCAAACACAGGTTCCTATCCCCAACAATGAAAGAATCAAAACGACAAGACACCCTCGATGGAGCAGACAGGAAACAATCATCCTCATAGGTGCCAAGAAGATGGTTGAGAATGGAGGGGCATCGGTTTGCCGGTTCACTCAGTCCGAACCAAAATGGGATTCGGTCTCATCGTTCTGTCAAAAACATGGCGTGAACAGAGGACCTGTTCAGTGTCGAAAGAGATGGAGCAATCTTCTTAGCGACTTCAAGAAGATAAAGAAGTGGGAGACGAATATAAAGCAACAGTCTGAATCATTCTGGATGATGAGAAACGATGAACGGAGGGAGAAGAAATTGCCAGGTTTCTTCGACGGGGAGGTGTATAACGTATTGAATGGAGAAGCGTGCACCGCTTCAGCATTTCCGTTGACACTAATTAAAGTCACAAAAGCAGAGAATGGTGATGGAGGTACAACAATGGGGTCAGAGCAATGTGAGGAGGATGAGGATGAAGAGGATGAGGCTATCGTTGACAGTGAGAAAATGGCTTGGAGCACAGAGGACGAATCCTTCGAGATGATCACGAGTGCGAAGAAAGTCACCGATCCGTTGAATAATGCTTCAGGTGTTGAGGAAACAATCATGATAGCGAATCCAGAAAAGACGCCCACTCCTCCTCGGCTCAGTTCAGGTACGATGCGAATACATAAAGACCCCAAGCAGTCACTTTTATGGAAATCTGAAGCAAATTACAGAGGCTCAGGCAAGAGAACAGAGACTATGTCCCAAGAGGGGTGCAAGAAAAGGCGTGTGTCACCAGAAAATCATGAGGACGCAGCAGCTTTCAGGAATCCGTTGATGAAAGTACTGAGAAGGAATGGCAACATACTGAAAGCTCATCTTAGCGATCAAAACATGAGTTACCAGTTGGCCAGGGATCAGCAGAAGGAGCAAACAAGCAACATAGTTGCTGCACTTGGCAGGCTCACGGATGCTCTCATAAAAATTGCTGAAAAGCTGTGA 1068 0.4625 MALEPEKIYEDATCPPASAEDLQTQVPIPNNERIKTTRHPRWSRQETIILIGAKKMVENGGASVCRFTQSEPKWDSVSSFCQKHGVNRGPVQCRKRWSNLLSDFKKIKKWETNIKQQSESFWMMRNDERREKKLPGFFDGEVYNVLNGEACTASAFPLTLIKVTKAENGDGGTTMGSEQCEEDEDEEDEAIVDSEKMAWSTEDESFEMITSAKKVTDPLNNASGVEETIMIANPEKTPTPPRLSSGTMRIHKDPKQSLLWKSEANYRGSGKRTETMSQEGCKKRRVSPENHEDAAAFRNPLMKVLRRNGNILKAHLSDQNMSYQLARDQQKEQTSNIVAALGRLTDALIKIAEKL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1077 355 SUPERFAMILY Homeodomain-like 38 109 IPR009057 -
Lele20g1077 355 Gene3D - 42 106 - -
Lele20g1077 355 ProSiteProfiles Myb-like domain profile. 41 101 IPR001005 -
Lele20g1077 355 MobiDBLite consensus disorder prediction 276 291 - -
Lele20g1077 355 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 30 355 - -
Lele20g1077 355 Pfam Myb/SANT-like DNA-binding domain 40 124 IPR044822 -
Lele20g1077 355 MobiDBLite consensus disorder prediction 1 21 - -
Lele20g1077 355 MobiDBLite consensus disorder prediction 266 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1077 Lele-ChrLele20 16372733 16374161 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele20g1077 Myb_DNA-bind_4 7.6e-11 CL0123