Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1070 ATGGAAGAGGAGAACGGCGGCTACAGCTTGTTACGCGACATGATAGTGCAGGAAAAACAGTCGAAGAAGACGAAGAAGAGCAGAGTGGCTCGAGAGTACGGTTGCTTCGGCGTTTGCGTGGGTGCGGAGAGGCAGAGATTCGTGGTCAAGATGGAGCATGCGAATCACCCACTCTTCATGGCTCTGCTCGAAGATGCTGAGAATGAATATGGCAAGTCGATTCATAACGACGGTCCTATATATATTCCTTGCGACGTGGATGTGTTCTGCGAGACAATGGCTGAGATCATCATCGCCGATTTTGATTCCTCTGTTTCCGATGGTGCCACGTCATCTTATCGATTGCTAAACACAGTTGGGCTCGCCGGCTTTTCAAGATTCCGAGGGCTCTTTAAGTTTAATTTGAAGCTCAACCGTCTGTTGTAA 426 0.4883 MEEENGGYSLLRDMIVQEKQSKKTKKSRVAREYGCFGVCVGAERQRFVVKMEHANHPLFMALLEDAENEYGKSIHNDGPIYIPCDVDVFCETMAEIIIADFDSSVSDGATSSYRLLNTVGLAGFSRFRGLFKFNLKLNRLL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1070 141 Pfam Auxin responsive protein 21 93 IPR003676 GO:0009733
Lele20g1070 141 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1070 Lele-ChrLele20 16326006 16326431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1070 34 108 Calmodulin-binding Proteins AT4G34750 45.333 2.72e-14 63.9