Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1069 ATGAAGATTACTTCTAAGTTCCACCAAGGTTCAAGCTTGATGGAAAAAACAAAAGATTCAAACTTTGATGAGCTTGATGTGAAGCAAGGAGAACCCATTCTGGTTCCACCTGCAGAAGAAACAGACAAGGGTCCTTACTTCCTTTCAAACCTGGACCAGAACATAGCAGTACCAGTTCGGACAGTTTATTGTTTCAAATCTGCTTCTCGAGGGAACGAGGATGCTGGAACAGTTATCAGAGAAGCCTTGTCCAAGATTCTTGTTCCTTATCATCCCATGGCCGGTAGGTTAACGATCAGTTCTGAAGGTAAGCTGATAGTTGATTGTACTGGTGAGGGTGCAGTGTTCGTTGAGGCTGAAGCAAACTGCGAGATAGAAAAAATAGGAGATTTAACAAAGCCTGATCCTTCAACTCTTGGGAAATTGGCTTATAGCGTCCCTGGTGCCAACACCATACTTGAGATGCCTCTTATCACTGTTCAGGTGACAAGATTCAAATGTGGAGGCTTTACATTGGGGCTGGCTATGAATCACTGTATGAAAGATGGACTCTGTGCTATGCAATTCGTAAACGCATGGAGTGACACTGCAAGAGGCTTAGACTTAAAGATTCGTCCATTTCTCGATCGAACCGTACTCAAAGCACGTGACCCTCCTGTTATAGAGTTCCCACACCATGAATTTGCAGAGATTGAAGACATATCAGATACCTCAAAACTATACGAGGAAGAAGACATGCTCTACAAATCCTTCTGTTTCGATCCAGATAAGCTTGGGCTTCTCAAGAAAAAGGCCATGGAAGATGGGGTTCTTCAAAAGTGCTCTTCTTTTGAAGCCCTAGCTGGTTTTGTATGGAGAACTCGAACTGAAGCCTTGAGGATGAAACCAAATCAACAAACCAAGCTTCTTTTCGCTGTTGATGGACGGTCCAGATTCGTTCCTCCAATACCAGAGGGCTACTTCGGAAACGCCATAGTTTTGACAAATTCTCTGTGTGAAGCAGGTGAGTTATTGACGAATCCTTTATCTTTCACAGTTGGGTTGGTTCAGAAGGCCATTGAAATGGTTACAGATAGGTACATGAGATCTGCTATAGATTATTTTGAAGCGACAAGAGCAAGGCCTTCATTAACAGCGACACTTTTGATTACAACTTGGACGAGGTTGTCTTTCCACACAACAGATTTTGGATGGGGACAACCTCTGTGTTCTGGGCCTGTCACCTTGCCTGAGAAAGAGGTCATCTTGTTCCTCTCTCATGGAGGAGAGAGGAAGAACGTAAATGTTCTTCTGGGTTTGCCTGCTTCTGCCATGGAAATCTTTGAAGCACTCATGCAGTTATGA 1344 0.4368 MKITSKFHQGSSLMEKTKDSNFDELDVKQGEPILVPPAEETDKGPYFLSNLDQNIAVPVRTVYCFKSASRGNEDAGTVIREALSKILVPYHPMAGRLTISSEGKLIVDCTGEGAVFVEAEANCEIEKIGDLTKPDPSTLGKLAYSVPGANTILEMPLITVQVTRFKCGGFTLGLAMNHCMKDGLCAMQFVNAWSDTARGLDLKIRPFLDRTVLKARDPPVIEFPHHEFAEIEDISDTSKLYEEEDMLYKSFCFDPDKLGLLKKKAMEDGVLQKCSSFEALAGFVWRTRTEALRMKPNQQTKLLFAVDGRSRFVPPIPEGYFGNAIVLTNSLCEAGELLTNPLSFTVGLVQKAIEMVTDRYMRSAIDYFEATRARPSLTATLLITTWTRLSFHTTDFGWGQPLCSGPVTLPEKEVILFLSHGGERKNVNVLLGLPASAMEIFEALMQL 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1069 447 FunFam Spermidine hydroxycinnamoyl transferase 25 228 - -
Lele20g1069 447 Gene3D - 21 230 IPR023213 -
Lele20g1069 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 35 443 - -
Lele20g1069 447 FunFam Tryptamine hydroxycinnamoyl transferase 232 446 - -
Lele20g1069 447 Pfam Transferase family 34 444 - -
Lele20g1069 447 Gene3D - 231 446 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1069 Lele-ChrLele20 16321050 16324263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1069 34 445 Monolignol Biosynthesis Gene Families AT5G48930 38.372 3.48e-91 281