Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1041 ATGGAATGCAATAAAGAGGATGCCATGAAGGCTAAAGAGCTTGCTGAGAAGAAGATATTAGAGATGGATCCTGCTGGCGCAAAAATGTTTGCCCTGGAGGCTCAAGACTTGTCCCCTAATCTTGACGGTCTTCCTCAACTGCTAGCAACAATTGAGGTTTATGTCTCTGCTGAAAGAAGAATAAATGGGAAAGTTGATTGGTATAGGGTTCTTGGGGTGGACCCAATGGCTGATGATGAAACTATTCGAAGATGTTATAGGAAACTGGCTCTAACACCACACCCTGATAAAAACAAATCAACAGGTGCAGATGGTGCTTTTAAATTAATCTCTGAAGCGTGGAATTTGCTTTCTGACAAAGCAAAGAAAATCTCGTATGACCAAAGGCGCAATTTTCAGGGTATATATGAAGGAACTCCATATGGGAAGCCTTCGGTACCAGCTGGTGAGAGTGGTTTCTATAATTCCTTCAATAGAGACCCCAGGAGTTCTGCTCATCCCAATCCTCCTCACATGCCTCCTGTGACCCCAAAGCAAACATTTTGGACCATATGCAATTCTTGCGGAACACAGTTTGAGTACCCTTCAGCTTATCTTAATCACAGTCTTGTATGCATGCTCTGCCATACGCCCTTCATAGCTTTTGCGATGCCTACGCCATCTATATACAGGAATACTTCATACACCTCAAAAGGAAGAATGAAGAAAACTCCTGCCAAGCACTCATCAGAAACAATGGATGGATCAAGTCCTTTTTTCATGCCAAGTGGTATTTCCAGTGTACCAACAGCAAGTTCATTTTCTGGCATAGATTCTAATAATAATTTGAAGAGAGGTCATGAACATAAAACACCTCCTGTCATGATGGAGGAGGCCCAATTTGGGAAAACTCAAACTGTTAAGACAACCGATGCTGGTTCAGCTTTTCAATCATCTTGTCTTGGCTCCAATTCTGTTCCAAAAAGAGACAGGCCAAGGAAAAAAAGACACATAGATAAGCGCAGGGAGGATAATGATAGAAAAGAGAAGAAAGCGGTAATGGCCTCTCACAATGAAGGAATAAGCATGGGTGATGAGCATGGATCTCGTAAGGGTAGTTGTGAGACACAGAGAGTAAATGCTGCTGGAAACTGCAAACATAATGGAATGAGGGATATGCCCCAACAGCAAATAAGGAAAATGTTGGTGGACATGGCTAGGAAGGATATTCGAAGGAAGCTTGATGAATCAGGAGTTGCCTCTGTATTAAGGAATTTAGACAAGTCAAGGAATACTAACAAGGAAGCAAAAGAGAAAGGCAAAGAGAGGAGTGGGAATGCTGTGAAATCTGGTGCACAAGAATGTCTAGAATTTGTTGATTCAGAGGCCGGGGGCAAGAATTCCTCCTCTGGTGATACGGATATTCTTGTCGCTGAAGCAACTAATTCTCTGTCTATGAGTGTTCCTGACCCAGACTTTCATGATTTTGACAATGACCGAACCGAAAAAGCCTTAGGCGAGAATCAGGTGTGGGCTGTTTATGATGATGATGATGGCATGCCTCGTTACTATGCTCTGATCCATGATGTAATTTCTTTAAAACCCTTCAAAATGAAGATTAGTTGGCTTAACTCCAAAAGCAATGATGAACTGGCTCCAGTCAAGTGGATTGGTTATGGCTTTCCCAAGACTATTGGTGATTTCCGGACAGGCAAGCATGAATTTAATGTCCCAATCAATTCTTTCTCTCACAGAGTTAAATGGAAGAAAGGCTCAAGAGGAGTTATAAATATATATCCGAAGAAGGGGGATGTTTGGGCTCTATACAGGAACTGGTGTCCTGACTGGAATGAACTGACTCCTGATGAAATTGTTCATAAATATGACATGGTCGAAGTACTTGACAACTACAATGAGGAACGAGGTGTGGATGTTGCTCCACTTGTTAAAGTTGCAGGTTTCAAGACAGTATTCTTCCGGCATGTTGATCCTAGAAATGTCAGGAATATTCCCAGGGCTGAGATGTTTCGTTTGTCACACCAGGTGCCTGCATACTTGCTCACTGGTCAAGAAGGCGCTAATGCTCCTAGAGGTTGCTTGGAGCTTGACCCTGCTGCTTTACCTATGGAACTTCTTCAGGTGGTCACAGGAGCACCGGAGCCGGGAACAGAAACGACGATCGGAAAATCTTCAGCAGATCCAATAGAGCCTAGACAGAACTCTGGAGAAAATGAGGAGGTCAAGGCGTTTCAGATAACCAAGGAAAAAGATTCTGCAGAAGATATTTCGGGGGGAGCAGTGGCTGAAGCACTGAAAAAGAAGGGAAATGCGCCAGAGAATTTGATTGTATATAAGAGGAGACGTACAAGGGAAAAGAGCGAGATGTAA 2367 0.4309 MECNKEDAMKAKELAEKKILEMDPAGAKMFALEAQDLSPNLDGLPQLLATIEVYVSAERRINGKVDWYRVLGVDPMADDETIRRCYRKLALTPHPDKNKSTGADGAFKLISEAWNLLSDKAKKISYDQRRNFQGIYEGTPYGKPSVPAGESGFYNSFNRDPRSSAHPNPPHMPPVTPKQTFWTICNSCGTQFEYPSAYLNHSLVCMLCHTPFIAFAMPTPSIYRNTSYTSKGRMKKTPAKHSSETMDGSSPFFMPSGISSVPTASSFSGIDSNNNLKRGHEHKTPPVMMEEAQFGKTQTVKTTDAGSAFQSSCLGSNSVPKRDRPRKKRHIDKRREDNDRKEKKAVMASHNEGISMGDEHGSRKGSCETQRVNAAGNCKHNGMRDMPQQQIRKMLVDMARKDIRRKLDESGVASVLRNLDKSRNTNKEAKEKGKERSGNAVKSGAQECLEFVDSEAGGKNSSSGDTDILVAEATNSLSMSVPDPDFHDFDNDRTEKALGENQVWAVYDDDDGMPRYYALIHDVISLKPFKMKISWLNSKSNDELAPVKWIGYGFPKTIGDFRTGKHEFNVPINSFSHRVKWKKGSRGVINIYPKKGDVWALYRNWCPDWNELTPDEIVHKYDMVEVLDNYNEERGVDVAPLVKVAGFKTVFFRHVDPRNVRNIPRAEMFRLSHQVPAYLLTGQEGANAPRGCLELDPAALPMELLQVVTGAPEPGTETTIGKSSADPIEPRQNSGENEEVKAFQITKEKDSAEDISGGAVAEALKKKGNAPENLIVYKRRRTREKSEM 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1041 788 MobiDBLite consensus disorder prediction 307 366 - -
Lele20g1041 788 MobiDBLite consensus disorder prediction 418 444 - -
Lele20g1041 788 MobiDBLite consensus disorder prediction 712 731 - -
Lele20g1041 788 Coils Coil 412 432 - -
Lele20g1041 788 Pfam Domain of unknown function (DUF3444) 477 684 IPR024593 -
Lele20g1041 788 MobiDBLite consensus disorder prediction 330 348 - -
Lele20g1041 788 Pfam DnaJ domain 66 127 IPR001623 -
Lele20g1041 788 MobiDBLite consensus disorder prediction 712 740 - -
Lele20g1041 788 CDD DnaJ 66 119 IPR001623 -
Lele20g1041 788 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lele20g1041 788 MobiDBLite consensus disorder prediction 421 438 - -
Lele20g1041 788 MobiDBLite consensus disorder prediction 153 173 - -
Lele20g1041 788 SMART dnaj_3 65 122 IPR001623 -
Lele20g1041 788 PANTHER BNAC03G44070D PROTEIN 1 701 - -
Lele20g1041 788 Gene3D DnaJ domain 63 166 IPR036869 -
Lele20g1041 788 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lele20g1041 788 SUPERFAMILY Chaperone J-domain 59 130 IPR036869 -
Lele20g1041 788 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lele20g1041 788 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lele20g1041 788 PRINTS DnaJ domain signature 86 101 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1041 Lele-ChrLele20 16190173 16192539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1041 4 218 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.769 1.23e-25 107