Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1025 ATGCAGGCGAAATTTTGTCCTGGCCTTGATGAAGTAGTGCAGAACACCGAAGCTGTTCGGAACTCTTTTTCAGACTCGAACCCCTTCGGGAATGTTGTGCAGCTTACGGCTTTTCTTCCATTTGAGTCCCCACTTGATGCCCTCAAACAGTGTAAAGCGGTCTCTGAAGCGTCATTACCATCGATTCAAGAGGCTGTGAATAGGTGTAAGAATGCGAAGTTCAGCTTGGGAGTAGCAGATCCTAAGATTGGTTCACAGATTTCTGAGCTAACTAAAATTCCTTGCCAAAGTAATGAGTTTGTGGGTGAGCTGCTTCGTGGTGTGCGACTTCATTTTGATAAGTTTATGAAGGATCTCAAGGGCAAAGGCTTAACAGACATAGTTGGAGATGAGGATAAGGCAAAGGAGATAGTTGAAGCTGCCAAGGCATCTATGGGTAGAATTCTTGTGCATTTTTTTGCACGTAACAGGGTTATGGATCTCTCTGAGTATAGAAGGAAGCTCTATGATTATCTGGTTACTAAGATGAACGACATAGCACCAAACTTGGCCTGTTTGATTGGTGAAGCCGTTGGTGCTCGTTTGATTTCCCATGCGGTAGTCTCACCAATTTGGCTAAGTGCCCCTCTTCTACTCTCCAAATTCTTGGTGCAGAGAAGGCTTTGTTCTGGTTTTGAACTCAATACCTGTTTTGTTTGTTTTTTAAGTTGTAAATACTTATTGGCATTGAAAACCAGCGGAAACACTCCTAAATATGGCCTGATATTCCATTCATCTTTTATCGGTCGAGCATCTGCTAGAAGTAAGGGGCGAATGGCTCGCTATCTTGCAAACAAGCGTTCAATTGCATCACGCATTGACTGCTCTTCTGTTAATGCTCCAGACACACAAATGGAGTCAGACGTGCCTGTTGAAGTATCAAGCAAGAAAAGCAAGGAGAAGTCGAAAGGTTCCGCAGACGAAGGTGAAGACATGGTTGTGGATGAGCCCACAGAAATTACAAGTGGTGGTGCACTGGAGGATCATAAATCAGAAAAGAAAAAAAAGAAAGAAAGAAAAGAAGAAATTGGGTCAGGAGATGGAGCTTCAGGGCTTAAAGATTTGGCTTCGCAACTTGATGAGATGCTGCAGAAGAAGGGGGTTAAAGTTGATAAAGTGCTGAATTTCGCAATTGATGATGCAATCCTAGAGGAGCGTATTACTGGTCGCTGGATTCACCCATCCAGTGGCAGAACTTACCACACAAAATTTGCTCCTCCCAAGATTCCTGGGGTTGATGATGTCACTGGTGAGCCTCTAATCCAGCGCAAGGATGATACAGCAGCTGTTCTCAAGTCAAGACTGCAGGCTCTTCACAGGCAAACTGAACCGCTGAGAAACCTCCCAAAGAGGTGCCGGCTGAAGTGGAGAAGACTTCCCGGAAGTGATAATACCAGGAGAAGCCCCAGAGTTGAGGTGGGTCAATCTGATACGGTGGCGATTCTCTTCTCTTCGGGAACCACAGGCCGAGTCAAGGGACTTCTGTTGACTCACTGGAATTTTATTCAAGTCATCAGCGGCTTTTATCACCCGAGGCACCTGAATATAAATGACGAAGAACGGCGTGTGTACTTGATCCCATTGCCTCTGTTTCACGTTTTTGGGTTTTTCATGCTGCTTTCGACCGTGGCAACGGCGGACGCCATGGTTTTGATGCAGAGGTTCGATTTCGAAGAGATGCTGAAGGTTGTAGAGAGATACAGAATTACGATCATGCTGGTGTCGCCACTTGTAGTGGCGCTGACTAAGTCGGAGTTGGTAAACAAGTGCGACCTTAGCTCCCTTCGACTTCTCGGCAAGGAGGTGGCAGAAAACTTCAAAGTCAAAATTTCTAACGCAGAAATAGGCGAGGAGGGTTGA 1899 0.456 MQAKFCPGLDEVVQNTEAVRNSFSDSNPFGNVVQLTAFLPFESPLDALKQCKAVSEASLPSIQEAVNRCKNAKFSLGVADPKIGSQISELTKIPCQSNEFVGELLRGVRLHFDKFMKDLKGKGLTDIVGDEDKAKEIVEAAKASMGRILVHFFARNRVMDLSEYRRKLYDYLVTKMNDIAPNLACLIGEAVGARLISHAVVSPIWLSAPLLLSKFLVQRRLCSGFELNTCFVCFLSCKYLLALKTSGNTPKYGLIFHSSFIGRASARSKGRMARYLANKRSIASRIDCSSVNAPDTQMESDVPVEVSSKKSKEKSKGSADEGEDMVVDEPTEITSGGALEDHKSEKKKKKERKEEIGSGDGASGLKDLASQLDEMLQKKGVKVDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKIPGVDDVTGEPLIQRKDDTAAVLKSRLQALHRQTEPLRNLPKRCRLKWRRLPGSDNTRRSPRVEVGQSDTVAILFSSGTTGRVKGLLLTHWNFIQVISGFYHPRHLNINDEERRVYLIPLPLFHVFGFFMLLSTVATADAMVLMQRFDFEEMLKVVERYRITIMLVSPLVVALTKSELVNKCDLSSLRLLGKEVAENFKVKISNAEIGEEG 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1025 632 Pfam Adenylate kinase 368 458 - -
Lele20g1025 632 ProSitePatterns Putative AMP-binding domain signature. 494 505 IPR020845 -
Lele20g1025 632 MobiDBLite consensus disorder prediction 305 323 - -
Lele20g1025 632 Gene3D Nop domain 183 312 IPR042239 -
Lele20g1025 632 Gene3D - 360 477 IPR027417 -
Lele20g1025 632 MobiDBLite consensus disorder prediction 292 365 - -
Lele20g1025 632 ProSiteProfiles Nop domain profile. 179 315 IPR002687 -
Lele20g1025 632 Pfam snoRNA binding domain, fibrillarin 154 199 IPR002687 -
Lele20g1025 632 Pfam snoRNA binding domain, fibrillarin 242 300 IPR002687 -
Lele20g1025 632 SUPERFAMILY Nop domain 124 199 IPR036070 -
Lele20g1025 632 Pfam AMP-binding enzyme 475 611 IPR000873 -
Lele20g1025 632 Pfam Adenylate kinase, active site lid 403 438 IPR007862 GO:0004017
Lele20g1025 632 Gene3D - 478 630 - -
Lele20g1025 632 MobiDBLite consensus disorder prediction 335 360 - -
Lele20g1025 632 Gene3D - 89 182 - -
Lele20g1025 632 CDD ADK 372 458 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele20g1025 632 Pfam NOP5NT (NUC127) domain 15 56 IPR012974 -
Lele20g1025 632 SUPERFAMILY Acetyl-CoA synthetase-like 460 612 - -
Lele20g1025 632 SUPERFAMILY Microbial and mitochondrial ADK, insert "zinc finger" domain 402 439 IPR036193 GO:0004017
Lele20g1025 632 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 242 354 IPR045056 GO:0030515|GO:0031428|GO:0032040
Lele20g1025 632 SUPERFAMILY Nop domain 240 290 IPR036070 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1025 Lele-ChrLele20 16093832 16100998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1025 467 628 Monolignol Biosynthesis Gene Families AT5G63380 49.708 1.10e-36 142