Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1024 ATGGCGAACCAGGTCGATCCAAGCTCTGGCTTTTGCCCTCAAACCAGAACATTCCATAGTCTTCGTCCTGACGTCCCTCTTCCTCCACCCTCTCAACCTCTCTCCATCACCGACTACGCTCTCTCTCTCATTCCTCCGATCTCTTCCTCCACCACTGTCCTCATCGACTCCGCCACCGGCAGCCGCATCTCCTACTCCCTCTTTCTTCAACAAATCAAAAACCTCGCGTCCTCCCTCGCTTCTCTCACCCCTCTCTCCAAGGGCCATGTCGCCTTCATTCTCTCCCCTGCTTCTCTCCACATCCCAGTTCTTTACTACTCCCTCTTGTCTTTAGGAGTCACCATCTCACCCGCTAACCCTATTGGCTCTGATTCGGAGGTCGCTCACCAGTTTGAGCTCGCTCAACCTGTCATCGCATTCGCTACCTCCTCAACTGTTCACAAGATCCCTAAGCTTCGATACGGTACTGTAATAATCGACTCGCCTCAGTTCCTTTCCATGATCGATGGAACTTTCGGAAGTGGTAATGCTGATAACAGGGGCGTCCGAAGAGTTCAGATGAGCCAATCGGAGCCGGCGGCGATTCTCTTCTCATCTGGAACAACTGGAAGAGTGAAAGGTGTGTTATTGACTCACAGGAATTTGATTGCCCTCATTGGAGGATTTTACCACCTGAGGCACCTGATGGATTCGCAAGAGAATGAACCAATTCCGGTGTCCCTTTTGACGCTGCCACTTTTCCACGTGTTTGGGTTTTTCATGATGATTAGGGCGATATCGATGGGGGAGACTCTGGTTTTGATGCAGAGGTTCGATTTCGAAGGAATGTTAAAGGCGGTAGAAAGGTACAAGATTTCTTACATGCCGGTTTCTCCGCCACTCATTGTGGCGCTGGCTAAGTCGGAGTTAGTGAACAAGTACGACCTTAGCTCTCTGAGGTTGCTAGGGTGCGGCGGCGCGCCGCTTGGCAAGGAGGTGGCCGATAACTTTAAAACCAGATTCCCTGATGTGGAAATAATGCAGGGGTATGGTCTGACTGAAAGTGGAGGTGGGGCAACGAGAATGATAGGGTCTGAAGAGGCTAAGCGTCATGGCTCTGTGGGTCGACTTGCAGAGGCAATGGAAGCCAAGATTGTGGATCCGGTGACCGGAGAGCCATTGCCACCTGGTCAGAAAGGGGAACTATGGTTGAAAGGTCCAACAATAATGAAAGGTTATGTGAGAAATGAGGAAGCAACGGCTGAGACGTTGGATCCTGAGGGGTGGCTCAAGACGGGAGATCTTTGTTACTTTGATTCTGATGGTTTCCTCTACATTGTAGACAGGCTTAAGGAATTGATCAAATACAAAGCATATCAGGTTCCTCCAGCTGAACTGGAACATATACTTCACACTCACCCTGAAATTGCTGATGCTGCTGTGATTCCGTACCCTGATGAAGAGGCAGGGCAAATTCCAATGGCGTTTGTCGTAAGAAAGCCTGGAAGCAATATCAACGCAGATGAGGTTATGGAATTTGTGGCAAAGCAGGTTGCACCATACAAGAAGATACGGCTTGTAGCTTTCATTAATGCTATACCCAAGACTCCGGCGGGCAAAATTTTGAGAAGAGAATTAGTCGATTCTGCACTATCCAGTGCTTCTTCCAAATTATATGTTGCTGGAAATGGGTTCCACATTCTTGGTGCTCATACTGATAGTCCTTGTCTGAAACTGAAGCCTGCTACCAAGGCAGAGCTCAATAAAGCAGCTGCTGACAATGATTCAATTGAAAATGGACAGCAAAATGATAGAAAGAAGGCAAATGACAAAACAGGGAGTAAAAATGCAAAGCAACCCTCTCTTCTGCTTCAGTTGCTCGCAAGCAAGCTTGGGTGTGAACCAGATGACATATATGATTTCGAATTGCAAGCCTGTGATACTCAACCAAGTATAGTTGCTGGAGCTGCCAAGGAATTCATATTTTCAGGACGGCTTGATAACCTCTGCATGTCATTTTGCTCATTGAAGGCATTGATAGATTCTACATCTTCTGACAGCAGTCTAGAGGAAGAGACTGCTGTTAGAATGTTAGCTTTGTTCGACCATGAGGAATGTGGATCTAATTCTGCACAGGGAGCTGGCTCTCCGGTTATGCAGAGTGCCGTATCTAGGGTGACAAGTTCCTTCAGCTTGGATTCCAAGGACAAACACGAAGAGAACCATCAGCCTAAACTACATGGAGGACTTGTCATCAAACACAATGCAAATCAACGCTATGCAACCAATGCAGTGACTGCCTTCATATTCAGGGAGGTAGCAACGAAACATAACATTCCTGTTCAGGACTTCGTGGTGCGCAATGACATGCCTTGTGGTTCAACCGTCGGACCGATTCTTGCTAGTGGTGTGGGTATTCGTACAGTTGATGTGGGGGCTCCTCAGTTGTCAATGCATAGCATACGAGAAATGTGTGCTGTTGATGATGTGAAGCATTCATATGAGCATTTCAAAGCTTTCTTCCAAGAATTCTCTCATCTCGACGCCAAGATTGCTCTTGATGTATAG 2547 0.4755 MANQVDPSSGFCPQTRTFHSLRPDVPLPPPSQPLSITDYALSLIPPISSSTTVLIDSATGSRISYSLFLQQIKNLASSLASLTPLSKGHVAFILSPASLHIPVLYYSLLSLGVTISPANPIGSDSEVAHQFELAQPVIAFATSSTVHKIPKLRYGTVIIDSPQFLSMIDGTFGSGNADNRGVRRVQMSQSEPAAILFSSGTTGRVKGVLLTHRNLIALIGGFYHLRHLMDSQENEPIPVSLLTLPLFHVFGFFMMIRAISMGETLVLMQRFDFEGMLKAVERYKISYMPVSPPLIVALAKSELVNKYDLSSLRLLGCGGAPLGKEVADNFKTRFPDVEIMQGYGLTESGGGATRMIGSEEAKRHGSVGRLAEAMEAKIVDPVTGEPLPPGQKGELWLKGPTIMKGYVRNEEATAETLDPEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTHPEIADAAVIPYPDEEAGQIPMAFVVRKPGSNINADEVMEFVAKQVAPYKKIRLVAFINAIPKTPAGKILRRELVDSALSSASSKLYVAGNGFHILGAHTDSPCLKLKPATKAELNKAAADNDSIENGQQNDRKKANDKTGSKNAKQPSLLLQLLASKLGCEPDDIYDFELQACDTQPSIVAGAAKEFIFSGRLDNLCMSFCSLKALIDSTSSDSSLEEETAVRMLALFDHEECGSNSAQGAGSPVMQSAVSRVTSSFSLDSKDKHEENHQPKLHGGLVIKHNANQRYATNAVTAFIFREVATKHNIPVQDFVVRNDMPCGSTVGPILASGVGIRTVDVGAPQLSMHSIREMCAVDDVKHSYEHFKAFFQEFSHLDAKIALDV 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1024 848 Gene3D - 445 546 IPR045851 -
Lele20g1024 848 Gene3D Zn peptidases 728 845 - -
Lele20g1024 848 SUPERFAMILY Zn-dependent exopeptidases 552 835 - -
Lele20g1024 848 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Lele20g1024 848 Gene3D - 21 444 IPR042099 -
Lele20g1024 848 MobiDBLite consensus disorder prediction 584 609 - -
Lele20g1024 848 FunFam 4-coumarate--CoA ligase 2 445 546 - -
Lele20g1024 848 Gene3D Zn peptidases 576 727 - -
Lele20g1024 848 SUPERFAMILY Acetyl-CoA synthetase-like 53 545 - -
Lele20g1024 848 CDD 4CL 37 539 - -
Lele20g1024 848 Pfam Aminopeptidase I zinc metalloprotease (M18) 729 834 IPR001948 GO:0004177|GO:0006508|GO:0008270
Lele20g1024 848 Pfam Aminopeptidase I zinc metalloprotease (M18) 599 723 IPR001948 GO:0004177|GO:0006508|GO:0008270
Lele20g1024 848 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Lele20g1024 848 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 541 - -
Lele20g1024 848 Pfam AMP-binding enzyme 51 449 IPR000873 -
Lele20g1024 848 MobiDBLite consensus disorder prediction 592 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1024 Lele-ChrLele20 16086863 16092025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1024 5 551 Monolignol Biosynthesis Gene Families AT5G63380 62.567 0.0 696