Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1022 ATGGAGTGCAACAAGGACGAGGCTCTAAGGGCTAAGCAAATATCAGAAAGTAGAATGCAAATTGGTGACTTTGTAGGGGCACTGAAGTTTGCTACAAGGGCCCAAAAACTGTTTCCTGAAGTTGAAAACATTGTTCATATCCTTACAGTTTGTGAGGTTCACTGTGCTGCACAGAAGAAACTTTCTGGATCTGAAATGGATTGGTATGGAATTCTTCAGACTGAACAACTGGCAGATGAGGCAACCATAAAAAAACAGTTCAGGAAGCTCGCCCTGCTACTTCATCCTGATAAAAATAAGTTTTCAGGTGCGGAGGCTGCATTCAAGTTGATTGGAGAGGCAAATAGGTTGTTAAGCGACAAAGAAAAGCGGAAATTATACGACATTAAGTATAGAGCCTTCACGAGAACTGTGTCATCTAGGCCCCCATATTATAATTCAAATGGGAGTGTATTTGCCTCGAAACATGATGTACAGGCAAGAAATCATCAGAATTATTCACAGCCCTCAAGTTGGAATTCCTATCAGCAGGCTGGTCAACAAACTTTCTGGACAACTTGTAGTCATTGTAAAACTAGGTATGAATACTACAGAACTGTTTTAAATGCAACCTTACGCTGTCACCAGTGTTCTAGACCCTTTGTAGCTTGTGAGATGGGATTTCAGCATGGTCCACCTGAATATAAGTGGACATCAGACCATAAAGAATATTCAAATTTTGAATCCATGGCAAAATGCACTCATGGAGTTGATGGGCACTGTAAAGGTGGAAAGGGTGAGGATAGTGAGGTGGCTGCAGGAAGGGCAAAGGTAGATGTTAGAACGTCCAAACCTGCTTCATCCAAAGCCAGGGATTCTTATTCCTCCACTCATATTGGGAGTAAGAGGAATAGGGAGTCAGTTCCGGACCCCAGAGAAAGTTGCAAGACTGAGAATGGTAACGGTGTTAAAGATGCCAATGTTCAAGAAAGTGGCATTGGTCCTTCTGGACCTAAAGCAGAAGCACAGTCTAGGAGATCTTCCAGGCAAAGGAAGGAAGTTTCTTACTCTGAAACCCCCTGTGATGATGGTGATCTTGAGAGTCCTAAAAGGCGCCGGCAAAATGGATCATCTAGCACCATAAAAATGGAGAAAAGAGAAGAACCTGCAAGCTGTGGGTTGTCTAAACACAATCATTCAGCTAGTTCTGTAGCTGGCCTGGGTGGTGAGAGTGGAGAGAAAAACAATAAAGCAAATGGCATGCCTGAAGAAATATTGTTACAGAAGAGAACCAAAATTGAGCAATCTCATGTGCAAAGAGAGGAGCCAACCAAGTCAAGTGTTGATGACACAAACTCAAAAGCCGATCACTATCCTCCATTTAATTCAGCTGTCCCTTCTCTTCCAGATATCATCAATTGTCCTGACCCAGATTTCAGTGATTTTGAGAAGGATAGGGCGGATAATTGTTTTGCTAAAGATCAGTTCTGGGCCATATATGATCCAAGTGATAGCATGCCTAGATACTATGCTCGTGTGAAGAAAGTGCTGTCTCCTGGATTCAAGTTGCTGATTACTTGGCTGGAGGCTGACCCAGACGATGAAGGTGAGATTGATTGGCAAGACGCAGAATTGCCTGTTGGTTGTGGTAAGTTCAGACTGGGTGACACTCAAGAAATTGAAGACCATGCTATGTTCTCTCATCAGATGCATAATATTAAAGGAATTGGCAGAAGATGTTATGCGGTATATCCTAGTAAAGGGGAAACATGGGCAATATTTAAAGATTGGGATATAAACTGGAGTTCTAATCCAGAAAAGCATTGTAAGTATGAATATGAATATGTGGAAATCCTGTCAGATTTTACTGAGAATATTGGCATTAAAGTTGTGTATCTTGGCAAAGTGGAAGGCTTTGTTAGCCTCTTTCAGCAAACTGAGCGTAATGGACTTGGCTTATTTTGTGTTCCACCTAATGAGCTCTATAGGTTCTCACATCAAGTTCCTTCATTCAAAATGACTGGTGATGAAAGACATGGTGTTCCTCGTGGATCTTTTGAACTTGATCCTGCTGGTTTGCCTGTTGATCTTTTTGGAGTTGGTAATACTGGGGATGTGGATATGGGAGATGAAATGTTAGATGCTGGGGTCAAAAGTTCAGGCTACAAATCCTCTGAACAAAAAGTGGAGAATGTGACGCCTAATGAGAGTGGTCATGATGCAAAGGTAAATATGAATAATGATGTTAAAAGAGCTTCCCCAATACTTAGAAGATCGCCAAGGGGGTCTAACAGAAAAGATATGAATAATGGCCAACTTAATGGAAGTCAGTATGTGATAAGAGAGAATGGTAGCAAAGACATGGGCTGCGTGGACTTCAGTCAACCTGATGGATCTGATGAGCCTAGTCATGGGGGGAAGATGCATAAGACAGACGATGTTCAAAAGGCTTCCTCAGTACCCAGAAGATCCCCCAGGGGATTAAAAGGCAGAAGTATGGAAAATGGTCGAGCAAATGAAAGTCAACATATGACAAGCGAGGATGGTAGCAAATATGTAGGTTGCAAGGACTTCAGTCAACCTGAGGAAATTGCTTCCGAAGATCAGGCTGGCGAGAGGGTTCAAACAACAAAGAAACATGAGAAAAATGGTTGTGGAAGAGAAGGTTCCGATGTGCAAAGATCACCTAGAGATTTAAGCAAGAAAAAAGCCCAAGTAGATGCAAATCAAGGCATGACTGGCAAGGTAAGTGGTGAACATTCAGATGCCTACAAAAAGTTGGATAGCAGATTTTCTGAGTCTTTCGGAGGTGTTTGTGGACCTTTCACTGAAGATTGCAGAGTTCCAAAAGCATCACGCTTTATGGTAAAATCTGAAGAAATGTTTCAGCATGGTCAGATATGGGCATTATATGGTGATAAGGATCGGACGCCCCACACTTATGCACAAATTAAGAAGATTGATTTTGCCCCTGATATCAGATTGCACGTGGCCTTCCTTGAACCCTGTTCACTGCCCAAAGGCATAACTGGCATGGTAGCTTGTGGCGCCTTTAAGATTAAAAATGCTAAAACCCGTGTTGTTTCCATTTCCAATTTCTCTCATCAGTTAAGAGTTGAACCCAGGAAAGATAATAGGTATGAAATTTATCCAAGGAAAGGTGAGATATGGGCGTTATACAAGAACCAGCACCGGGGATCAACTTGTTCAAATCAGGTGAGAGGTGATTGTCACATAGTGGAAGTGTTGAAAGATGATAATGAGAATTCAAAAGTTGTGGTTCTTGTTCGTCATAACGACTCTAGGCCAATTTACAAGACTCCTAGAATTCAGAGATCTAAAAAAGTTATCATTGATATACCACGAGTGGATGCATATAGATTCTCTCACCAGATTCCTGCTTTTAAGCACACTGATGGCGAAACTCATCTCAAAGGATGTTGGGAGCTTGATCCTTCATCAATTCCTGGTTTTGTAATAAATTTAGACTGA 3471 0.4177 MECNKDEALRAKQISESRMQIGDFVGALKFATRAQKLFPEVENIVHILTVCEVHCAAQKKLSGSEMDWYGILQTEQLADEATIKKQFRKLALLLHPDKNKFSGAEAAFKLIGEANRLLSDKEKRKLYDIKYRAFTRTVSSRPPYYNSNGSVFASKHDVQARNHQNYSQPSSWNSYQQAGQQTFWTTCSHCKTRYEYYRTVLNATLRCHQCSRPFVACEMGFQHGPPEYKWTSDHKEYSNFESMAKCTHGVDGHCKGGKGEDSEVAAGRAKVDVRTSKPASSKARDSYSSTHIGSKRNRESVPDPRESCKTENGNGVKDANVQESGIGPSGPKAEAQSRRSSRQRKEVSYSETPCDDGDLESPKRRRQNGSSSTIKMEKREEPASCGLSKHNHSASSVAGLGGESGEKNNKANGMPEEILLQKRTKIEQSHVQREEPTKSSVDDTNSKADHYPPFNSAVPSLPDIINCPDPDFSDFEKDRADNCFAKDQFWAIYDPSDSMPRYYARVKKVLSPGFKLLITWLEADPDDEGEIDWQDAELPVGCGKFRLGDTQEIEDHAMFSHQMHNIKGIGRRCYAVYPSKGETWAIFKDWDINWSSNPEKHCKYEYEYVEILSDFTENIGIKVVYLGKVEGFVSLFQQTERNGLGLFCVPPNELYRFSHQVPSFKMTGDERHGVPRGSFELDPAGLPVDLFGVGNTGDVDMGDEMLDAGVKSSGYKSSEQKVENVTPNESGHDAKVNMNNDVKRASPILRRSPRGSNRKDMNNGQLNGSQYVIRENGSKDMGCVDFSQPDGSDEPSHGGKMHKTDDVQKASSVPRRSPRGLKGRSMENGRANESQHMTSEDGSKYVGCKDFSQPEEIASEDQAGERVQTTKKHEKNGCGREGSDVQRSPRDLSKKKAQVDANQGMTGKVSGEHSDAYKKLDSRFSESFGGVCGPFTEDCRVPKASRFMVKSEEMFQHGQIWALYGDKDRTPHTYAQIKKIDFAPDIRLHVAFLEPCSLPKGITGMVACGAFKIKNAKTRVVSISNFSHQLRVEPRKDNRYEIYPRKGEIWALYKNQHRGSTCSNQVRGDCHIVEVLKDDNENSKVVVLVRHNDSRPIYKTPRIQRSKKVIIDIPRVDAYRFSHQIPAFKHTDGETHLKGCWELDPSSIPGFVINLD 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1022 1156 MobiDBLite consensus disorder prediction 713 735 - -
Lele20g1022 1156 MobiDBLite consensus disorder prediction 259 279 - -
Lele20g1022 1156 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lele20g1022 1156 MobiDBLite consensus disorder prediction 289 312 - -
Lele20g1022 1156 MobiDBLite consensus disorder prediction 426 445 - -
Lele20g1022 1156 CDD DnaJ 67 120 IPR001623 -
Lele20g1022 1156 SUPERFAMILY Chaperone J-domain 63 133 IPR036869 -
Lele20g1022 1156 Gene3D DnaJ domain 52 142 IPR036869 -
Lele20g1022 1156 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1149 - -
Lele20g1022 1156 MobiDBLite consensus disorder prediction 854 897 - -
Lele20g1022 1156 MobiDBLite consensus disorder prediction 337 386 - -
Lele20g1022 1156 MobiDBLite consensus disorder prediction 426 446 - -
Lele20g1022 1156 Pfam DnaJ domain 67 128 IPR001623 -
Lele20g1022 1156 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lele20g1022 1156 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lele20g1022 1156 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lele20g1022 1156 SMART dnaj_3 66 123 IPR001623 -
Lele20g1022 1156 MobiDBLite consensus disorder prediction 795 812 - -
Lele20g1022 1156 MobiDBLite consensus disorder prediction 712 914 - -
Lele20g1022 1156 MobiDBLite consensus disorder prediction 259 411 - -
Lele20g1022 1156 MobiDBLite consensus disorder prediction 758 774 - -
Lele20g1022 1156 Pfam Domain of unknown function (DUF3444) 464 670 IPR024593 -
Lele20g1022 1156 Pfam Domain of unknown function (DUF3444) 939 1132 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1022 Lele-ChrLele20 16078239 16081709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1022 4 267 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.740 4.35e-24 103