Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1009 ATGAAGAGGGCCACAACAATTTCTTCAATTTTCATCATCTTAATAACGATTTCCGTTGAGTTCTTCAATGTTTCTTCATCGTCGCCTCCCTTACATGAAAACCAGGTTTTTGAGGAATCTGCTGGTGGAAGACATAATAAACATGACCAAGAGCATCCTCAAGAAGTACATTGCTCAAGAGAAAGAAGTAGGGCAGCTTCAAAAATAATTGAGGAGTATTTGGTGCCATTCATGGAACGAGAAAACTATCAGCTCCCAGAAAAGTGCAGACTTCATCCCGACAATAATATATTCAGGGATCAGGAAGAGCATAAAATTCACATAGATATAAATGAATGGCGGTGTGGATATTGTAGGAAAAGCTTCCGTGCTGAAAAATTTCTTGATCAGCATTTTGATAACAGACACTACAGTCTTCTAAATGTAAGTCATGGCAAGTGCTTGGCTGATTTATGTGGGGCATTGCATTGTGATGCTGTGACTCATACCAAGACCTCTAAAACCAAGTGTAATCTGGCAGCTGGGAGAAATCGTCACCTATGTGAGAGCCTTGCAGATAGTTGTTTTCCCTCAAATGGGGGCCCCTCATCAAGCCGCCTTCATGAATTGTTTCTGCACCAATTTTGTGACGCCCACAGCTGCTCAGGGAAACAGAAACCCTTTGTTAGAGGTGGCAGGAAGCAAAAGAGTATCTTCTATTTGGCTGCTGGAGCATTGACCTTGGTGCTACTTCCTGTGTTTTATCTTTTTGTTTATTTGGTACAAAGAGATATGAGGAGTCGAACCCAAGAGCTTCGGCGCATTACAAAAGTGGGGCGAAAAACAAAACCATCATGA 837 0.4182 MKRATTISSIFIILITISVEFFNVSSSSPPLHENQVFEESAGGRHNKHDQEHPQEVHCSRERSRAASKIIEEYLVPFMERENYQLPEKCRLHPDNNIFRDQEEHKIHIDINEWRCGYCRKSFRAEKFLDQHFDNRHYSLLNVSHGKCLADLCGALHCDAVTHTKTSKTKCNLAAGRNRHLCESLADSCFPSNGGPSSSRLHELFLHQFCDAHSCSGKQKPFVRGGRKQKSIFYLAAGALTLVLLPVFYLFVYLVQRDMRSRTQELRRITKVGRKTKPS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1009 278 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
Lele20g1009 278 PANTHER ZINC FINGER PROTEIN-RELATED 19 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1009 Lele-ChrLele20 16014540 16017459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1009 34 278 C2H2 Transcription Factor Family AT5G63280 62.500 9.92e-108 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele20g1009 None None None