Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele20g1006 | ATGGATCCCTCTGAATCCGATTTAACAGCTGTTTCGAACTCCATCAAAGACCCATTATTGGGCATTGAGTTAGCTTTTCCCCCCCCTAGTTCCCATCACCATCCTGAAACGTCAGATCTCAATCCCAGGGATGAGACTGATGCCCTTCAGGAAGCCCTGCAGGACAAGTTGGATTTGAAGGATAAGGATGAAGGGGTCGAAGAGGAAAAGGAGAAGAAAGATTCCGAATTCGATGATGGTAAAGAAGTAAGTGGTATAGCTGATGCCGGAGAATCTGAGAAGGAACAAGTTTTTGATGAAGTTAACCAGAATTGGAATGGAAATGGGGACGATGGTTGGGGGGAGAATGTGAACGAGAGCGAGAATTATAATTTTGGTATAGATAATGTAACTTTCGGTGATGAAGTGGAGAAGAACGATCAGGAAAGCAGCGGTAGAGCACTCCAGTATCCTGTGAGGCCCGAAGCTGAAGATTGCGCGTTCTATCTCAAGACTGGAACTTGCAAGTTTGGGTTCAACTGCAAGTTCAATCACCCTCTTAGGAGGAAAATCCAGGTTGTTAAGGAGAAACTTGAAAGAGAAGAATCAGGAGAAAGATCAGGGCAGACTGAATGCAAGTATTATCTAAAGTCAGGAGGTTGTAAATACGGAAAGGCTTGTAAATTTAACCACACCAGAGGAAAATGTTCTGCAACTGCAACCACTATTTTGGAACTTAACTTTCTTGGCCTGCCGATTCGTCTGGGAGAGAAAGAGTGCCCATATTATATGCGTACTGGCTCTTGTAAGTTTGGCGCAAACTGCAAATTCAATCATCCTGATCCTACTGTTGTTGGAGGAAGTGAACCTCCTTCAACATATGCTAATGGCGGGGCTGTTCCTTTACAAGGTGTATCGCAGCCAAACATACCCTCTTGGTCTTCTCCAAGAACATTAAATGAAACTGCTCCTTTTGTGCCAGTGGTGATTCCACCTGTTCAAGGGGTTTCTCCCCAAAGTTCTGATTGGAATGGATATCAGGCACCCCTCTACCTAACTGCGAGGACTATGCACCCACCATCTACATACGTTGTGAACAACCCAGCTTTTGAATCAAATGTCTATATGCATCATCCTCCAAAGCAGACGCAGGTTGATGAGTTTCCAGAAAGGCCTGGTGAACCAGAGTGCAGTTACTACTTAAAAACTGGGCATTGCAAATTCAAATCCAACTGTAAATTTCACCATCCAAAGAACCGTATTGCAAGACCTCCATGCACCCTAAGTGACAAGGGTCTGCCTTTGAGACCTGATCAGGGTGTGTGCTCGCACTATAGCCGCTATGGAATATGCAAGTATGGGCCATCGTGTAAGTTTGACCACCCAACGAACCTATTGCCGTCAAACATGCCTGGACTTGATAAGGAATCTGCTAGTGTGGAGGTGGCTGAGATGACTGGAAGTGGAGGTTCAGGTGATTCCCCAATTAGGCAGACTGTGTAA | 1482 | 0.4521 | MDPSESDLTAVSNSIKDPLLGIELAFPPPSSHHHPETSDLNPRDETDALQEALQDKLDLKDKDEGVEEEKEKKDSEFDDGKEVSGIADAGESEKEQVFDEVNQNWNGNGDDGWGENVNESENYNFGIDNVTFGDEVEKNDQESSGRALQYPVRPEAEDCAFYLKTGTCKFGFNCKFNHPLRRKIQVVKEKLEREESGERSGQTECKYYLKSGGCKYGKACKFNHTRGKCSATATTILELNFLGLPIRLGEKECPYYMRTGSCKFGANCKFNHPDPTVVGGSEPPSTYANGGAVPLQGVSQPNIPSWSSPRTLNETAPFVPVVIPPVQGVSPQSSDWNGYQAPLYLTARTMHPPSTYVVNNPAFESNVYMHHPPKQTQVDEFPERPGEPECSYYLKTGHCKFKSNCKFHHPKNRIARPPCTLSDKGLPLRPDQGVCSHYSRYGICKYGPSCKFDHPTNLLPSNMPGLDKESASVEVAEMTGSGGSGDSPIRQTV | 493 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele20g1006 | 493 | SMART | c3hfinal6 | 431 | 456 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | SMART | c3hfinal6 | 199 | 226 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | SMART | c3hfinal6 | 247 | 274 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | SMART | c3hfinal6 | 384 | 411 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | SMART | c3hfinal6 | 153 | 180 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | SUPERFAMILY | CCCH zinc finger | 203 | 228 | IPR036855 | GO:0046872 | |
Lele20g1006 | 493 | MobiDBLite | consensus disorder prediction | 36 | 96 | - | - | |
Lele20g1006 | 493 | MobiDBLite | consensus disorder prediction | 1 | 96 | - | - | |
Lele20g1006 | 493 | Gene3D | - | 363 | 422 | - | - | |
Lele20g1006 | 493 | Gene3D | - | 429 | 478 | - | - | |
Lele20g1006 | 493 | SUPERFAMILY | CCCH zinc finger | 427 | 455 | IPR036855 | GO:0046872 | |
Lele20g1006 | 493 | ProSiteProfiles | Zinc finger C3H1-type profile. | 153 | 181 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | SUPERFAMILY | CCCH zinc finger | 151 | 181 | IPR036855 | GO:0046872 | |
Lele20g1006 | 493 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 434 | 455 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 386 | 411 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 202 | 224 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 250 | 273 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 157 | 179 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | SUPERFAMILY | CCCH zinc finger | 248 | 275 | IPR036855 | GO:0046872 | |
Lele20g1006 | 493 | ProSiteProfiles | Zinc finger C3H1-type profile. | 384 | 412 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | Gene3D | - | 189 | 277 | - | - | |
Lele20g1006 | 493 | PANTHER | PROTEIN PHOSPHATASE RELATED | 25 | 464 | - | - | |
Lele20g1006 | 493 | SUPERFAMILY | CCCH zinc finger | 389 | 413 | IPR036855 | GO:0046872 | |
Lele20g1006 | 493 | Gene3D | - | 115 | 188 | - | - | |
Lele20g1006 | 493 | Coils | Coil | 49 | 69 | - | - | |
Lele20g1006 | 493 | ProSiteProfiles | Zinc finger C3H1-type profile. | 199 | 227 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | ProSiteProfiles | Zinc finger C3H1-type profile. | 429 | 457 | IPR000571 | GO:0046872 | |
Lele20g1006 | 493 | ProSiteProfiles | Zinc finger C3H1-type profile. | 247 | 275 | IPR000571 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele20g1006 | Lele-ChrLele20 | 16000723 | 16003534 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele20g1006 | 377 | 482 | C2H2 Transcription Factor Family | AT3G02830 | 38.393 | 5.24e-18 | 84.0 |