Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0994 ATGGAACCGGTTGAGGAAGAAGCCTCATCAGCTTTCCCCCCGTATCCTCGTCATCTCCATCTTCCTCTCTCAATGGCTCTCCCTTCTGCTAAATCACACCTTTTACTCTTTTCCTTATTCTCTCTTTTCTTCATCTTTCACGCCAAAGTTGATATTGATCCTTCAGATCTCAACGCTTTCTTGACTTTTCAGAAGGACTTGGGTTTCAATGGTCAACACCAACCGTTTACCACACAACCATGTAACACCGACGGTGTGTTCTGCCAGAGGAGTCTCTCCGGCAATGAGACCTATGCTCTCAGAATCACCAGAATCATCTTCAAGTCTAAGAAGCTTAATGGAGTTTTTTCCCCTGCTATTGGCCGTCTCTCTGAGATCAAGGAGCTTTCTCTTTCCCACAACCAACTCGTGAGCCAGATTCCAGCTCAGATAGTTGACTGTCGGAAACTGGAAATTCTTGACCTCGGAAGCAACCGCTTCTCCGGCGAGGTCCCTCCTGAATTGTCCTCCCTCATTCGCCTCCGAGTCCTGGACATATCTTCCAACAAATTCTCTGGGAATTTGAATTTCTTGAAGTATTTCCCCAACCTGGAAAGTCTCTCCGTGGCGGATAATCTCTTCACGGGCAGAATTCCAGCGTCCATACGTTCATTTCGCAATCTCCAACGCTTCAACTTTTCTGGGAATCACTTCCTTGAAATTCCTGTGCCTTTGATGAAGAGATTTGGACACTCATCATCTGATATCCCCAAAAGATACATCCTCACCGAGAATCCAGCTCCAACAACAAATCACACAACTTCTGCTCATGCTCCAAAATCCAGCAACAACCACTCTTATATTTCATCTGCTCCAGCTCCAGCCCCAACAGCACCACATCACGAACACAAGTCAAAGAGGAAACTAGGTGGATGGATTCTTGGATTCATAGCGGGAGCTTTCGCTGGGAGCATATCTGGGTTCATATTTTCGTTGATGTTCAAGTTGGCCGTAGCAGTGATCAAAGGGGGAGGGAAGAGCACAGGCCCTGCAATTTATAGTCCATTGATTAAAAAGGCAGAGGACTTGGCTTTTCTGGAGAATGAAGATGGGTTGAATTCATTAGAAATCATTGGAAAAGGTGGCTGTGGAGTAGTTTACAAGGCTGAAATACCAGGAAGCAACAAAATCGTTGCTATAAAGAAGGTCAATCAACCTTCAAAAGATGCAGCAGAACTATCTGAAGAAGACAGCAAGGTTCTGAACAAAAAATTGCGTCAAATTCGATCGGAGATCAACACAGTTGGTCAAATTCGACATAGAAACCTTCTACCTCTGCTAGCTCATGTGTCAAGGCCCGATTGCCACTACCTTGTATATGAATACATGAAGAATGGAAGCTTACAAGATGTTCTGAATCAAGTTCAAGCAGGAGCAAGAGAGTTAGATTGGTTGGCACGCCATAAGATTGCAGTGGGTGTAGCAGCTGGCCTCGAGTACCTTCACTTGCACCATACTCCACGTATCATTCACAGAGATCTCAAGCCTGGAAACATCCTTCTTGATGATGATATGGAAGCTCGAATTGCAGATTTTGGGCTTGCAAAAGCAATGCCAGAAGCTTATACCCATGTCTCAACTTCAAACGTGGCTGGAACTGTGGGCTACATAGCACCAGAATATCACCAGACAGTGAAATTCACTGACAAGTGTGACGTATACAGCTTTGGGGTTGTGCTTGGAATCTTAGTGATGGGAAAGATTCCATCTGATGCGTTCTTCCAGGACACAGAGGAGCTGAGTCTGGTGAAGTGGATGAGGAATGTGATGACGTCAGATAATCCTACGAGGGCAATAGATGAAAAGCTAAGAGGAAATGGATATGAGGAACAGATGCTTCTGGTTCTGAAGATTGCCTGCTTTTGCACTCTTGATGAACCCAAGGAGAGGCCTAACAGTAAGGATATCAGATGCATGTTGTCCCAAATCAGACACTGGTGA 1980 0.4515 MEPVEEEASSAFPPYPRHLHLPLSMALPSAKSHLLLFSLFSLFFIFHAKVDIDPSDLNAFLTFQKDLGFNGQHQPFTTQPCNTDGVFCQRSLSGNETYALRITRIIFKSKKLNGVFSPAIGRLSEIKELSLSHNQLVSQIPAQIVDCRKLEILDLGSNRFSGEVPPELSSLIRLRVLDISSNKFSGNLNFLKYFPNLESLSVADNLFTGRIPASIRSFRNLQRFNFSGNHFLEIPVPLMKRFGHSSSDIPKRYILTENPAPTTNHTTSAHAPKSSNNHSYISSAPAPAPTAPHHEHKSKRKLGGWILGFIAGAFAGSISGFIFSLMFKLAVAVIKGGGKSTGPAIYSPLIKKAEDLAFLENEDGLNSLEIIGKGGCGVVYKAEIPGSNKIVAIKKVNQPSKDAAELSEEDSKVLNKKLRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEYMKNGSLQDVLNQVQAGARELDWLARHKIAVGVAAGLEYLHLHHTPRIIHRDLKPGNILLDDDMEARIADFGLAKAMPEAYTHVSTSNVAGTVGYIAPEYHQTVKFTDKCDVYSFGVVLGILVMGKIPSDAFFQDTEELSLVKWMRNVMTSDNPTRAIDEKLRGNGYEEQMLLVLKIACFCTLDEPKERPNSKDIRCMLSQIRHW 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0994 659 FunFam Leucine-rich repeat receptor protein kinase EMS1 97 191 - -
Lele20g0994 659 SUPERFAMILY L domain-like 78 237 - -
Lele20g0994 659 SUPERFAMILY Protein kinase-like (PK-like) 358 653 IPR011009 -
Lele20g0994 659 Pfam Leucine rich repeat 125 184 IPR001611 GO:0005515
Lele20g0994 659 MobiDBLite consensus disorder prediction 257 284 - -
Lele20g0994 659 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 99 657 - -
Lele20g0994 659 Gene3D Transferase(Phosphotransferase) domain 1 460 658 - -
Lele20g0994 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 502 514 IPR008271 GO:0004672|GO:0006468
Lele20g0994 659 Coils Coil 404 424 - -
Lele20g0994 659 Gene3D Ribonuclease Inhibitor 190 248 IPR032675 -
Lele20g0994 659 Gene3D Ribonuclease Inhibitor 57 189 IPR032675 -
Lele20g0994 659 MobiDBLite consensus disorder prediction 256 297 - -
Lele20g0994 659 FunFam Leucine-rich repeat receptor-like protein kinase 456 659 - -
Lele20g0994 659 Gene3D Phosphorylase Kinase; domain 1 364 459 - -
Lele20g0994 659 SMART serkin_6 365 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0994 659 ProSiteProfiles Protein kinase domain profile. 365 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0994 659 Pfam Protein kinase domain 367 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0994 Lele-ChrLele20 15910852 15914488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0994 25 658 Receptor kinase-like Gene Family AT2G31880 61.231 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Lele20g0994 Pkinase 4.2e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1102 17 21361659 21363569 Lele20g0994 20 15910852 15914488 hybridization
Lele18g0438 18 2579478 2581388 Lele20g0994 20 15910852 15914488 hybridization