Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0974 ATGGAGTTCGAATCCAGAAATAAAAAACGCACCACTATCAAGTTCCTTTGTAGCTACGGCGGCAAGATTCTTCCTCGGGCCACGGATGGCAAGCTCCGCTACGTCGGCGGTCACACCAGAGTCCTCGCCGTCGATCCTTCTATTGCCTTTTCAGAGCTGATGTCAAAGCTTGAAGAGTTGTCTGGTTCGTCCGTGACGTTGAGATGTCCATTGCCCCACGGAGACTTGGAGACGTTGATTTCGATAACCAACGATGAAGATCTGGCCCATATAGTTGAGGAATATGATCGAGCTTCGTCGTTGTTAGCTCATCCGCTGAAGATCAGAGCCATTCTTTGGCTGCCCAAATCGCCCAAGAAAATATCTCCTGCTTCGTCTTCTTCTTCTAGCGCGAATCAATCTCCGTCCAGATCACCACACGCCTCCATCGAGTCCTTGCCTTATTCGGTGGCCTATCGCTTTATCTGTCACAACTGCTCACCGCCGATTGGATATCCAATCGGTGTCCGTAGCGGGACCCCTAAGTTTTGGTACGGTGGTTCCAACTGCAGCAATTACTGTCACTGA 567 0.5044 MEFESRNKKRTTIKFLCSYGGKILPRATDGKLRYVGGHTRVLAVDPSIAFSELMSKLEELSGSSVTLRCPLPHGDLETLISITNDEDLAHIVEEYDRASSLLAHPLKIRAILWLPKSPKKISPASSSSSSANQSPSRSPHASIESLPYSVAYRFICHNCSPPIGYPIGVRSGTPKFWYGGSNCSNYCH 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0974 188 SMART PB1_new 27 115 IPR000270 GO:0005515
Lele20g0974 188 Gene3D - 31 110 - -
Lele20g0974 188 PANTHER OS05G0427100 PROTEIN-RELATED 5 133 - -
Lele20g0974 188 CDD PB1_UP2 16 100 - -
Lele20g0974 188 Pfam PB1 domain 28 99 IPR000270 GO:0005515
Lele20g0974 188 SUPERFAMILY CAD & PB1 domains 29 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0974 Lele-ChrLele20 15814252 15814916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0974 14 94 MAP Kinase Kinase Kinase AT2G35050 49.383 1.37e-23 95.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1752 21 25275530 25276832 Lele20g0974 20 15814252 15814916 CCT
Lele22g1727 22 22624742 22625182 Lele20g0974 20 15814252 15814916 CCT
Lele23g0255 23 1777958 1778287 Lele20g0974 20 15814252 15814916 CCT
Lele24g1693 24 22284997 22285437 Lele20g0974 20 15814252 15814916 CCT
Lele17g1079 17 21274428 21276068 Lele20g0974 20 15814252 15814916 hybridization
Lele18g0462 18 2678778 2679444 Lele20g0974 20 15814252 15814916 hybridization