Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0971 ATGGGTCGCCATTCCTGTTGTGTGAAGCAAAAGTTGAGGAAAGGCTTGTGGTCTCCTGAAGAAGACGAGAAGCTCTTCAACCACATAACTAGATTTGGCGTTGGCTGCTGGAGCTCCGTTCCCAAACTTGCTGGGCTTCAAAGATGTGGAAAGAGTTGCAGATTGAGATGGATAAACTATCTGAGGCCTGATTTGAAAAGAGGCATGTTCTCGCAACAAGAGGAGGATATTATTCTGAGTCTCCATGAAGTTCTGGGAAACAGGTGGGCTCAGATTGCAACGCAGTTACCAGGAAGAACAGATAACGAAATCAAGAACTTCTGGAATTCGTGCTTGAAGAAGAAGCTGTTGAAGCAAGGGATTGACCCAGCCACCCACAAACCCTTCACTCAACCTCAAATAAATCAGGAGATCAACAATAACTTAGAGACACAAACACCATTATCTCTGCAAAATATGCATCATTTCTCAAACTTAGCCTCCTCAAATCAGTCAAAGGGAGGATCGTCACCTTTTCTGATAAGTGCCGATTCAAGTTATTACGACGCAGCTGTTTTAACAGAAGCCTCCAGAGACGAAATCCTCATGAGCATGAGCAATATTAAGCCTCGTGAATGGGTCGACCCTTTGTCGTACTACGAGTCATACACGAATCATCATCAGTTTCATCAGTATGGAACCAGTTCTTCAAGCTACGGGATCTGTTCATCAATGCCAAGTTTGAAGAGTTCGGATCAGAACAACTTGTCGTCCGCGATGACGACGACGGAATTCTCATCAGACAACAATAATAATAACTCAGGTTCGAAAATCAGTTCAAGCAATAACAGCTCAAATATGAGCGTTTATGTGATGGAGAATAATAATAACAATGGAGGGATGTTATCGTGGGAGGGAGAGAACAAGATGGTGGAGGCTTCATTGTTTCAGTTTCAAGCCAATGGTATAATAGAATCGGAGGAAAAACAACTGATGAACACAACATGCTCGTGGCAAGAAGCGGTGCAGCTTCAGAATCACAGTTCGGTAGATTTCAACAGCTATCCGTTAACGTCATTCTCACAAAATCTAACGGCCGCGACTTATGATGTATTCCGGCATGTATGA 1107 0.4336 MGRHSCCVKQKLRKGLWSPEEDEKLFNHITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDIILSLHEVLGNRWAQIATQLPGRTDNEIKNFWNSCLKKKLLKQGIDPATHKPFTQPQINQEINNNLETQTPLSLQNMHHFSNLASSNQSKGGSSPFLISADSSYYDAAVLTEASRDEILMSMSNIKPREWVDPLSYYESYTNHHQFHQYGTSSSSYGICSSMPSLKSSDQNNLSSAMTTTEFSSDNNNNNSGSKISSSNNSSNMSVYVMENNNNNGGMLSWEGENKMVEASLFQFQANGIIESEEKQLMNTTCSWQEAVQLQNHSSVDFNSYPLTSFSQNLTAATYDVFRHV 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0971 368 Gene3D - 11 67 - -
Lele20g0971 368 CDD SANT 70 109 IPR001005 -
Lele20g0971 368 SMART sant 13 63 IPR001005 -
Lele20g0971 368 SMART sant 66 114 IPR001005 -
Lele20g0971 368 Gene3D - 68 145 - -
Lele20g0971 368 CDD SANT 17 61 IPR001005 -
Lele20g0971 368 FunFam Transcription factor MYB86 69 137 - -
Lele20g0971 368 MobiDBLite consensus disorder prediction 245 275 - -
Lele20g0971 368 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele20g0971 368 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele20g0971 368 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele20g0971 368 FunFam MYB transcription factor 11 67 - -
Lele20g0971 368 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele20g0971 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele20g0971 368 PANTHER MYB DOMAIN PROTEIN 55 1 305 - -
Lele20g0971 368 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele20g0971 368 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0971 Lele-ChrLele20 15789821 15791125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0971 1 131 MYB Transcription Factor Family AT4G01680 80.916 2.24e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele20g0971 Myb_DNA-binding 7.7e-13 CL0123