Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0968 ATGATTCAATATGATTTAGATATGAAAAGGGAGTTTCTGGCTTTACTAGAGCCTAGCAACTGTTCCTTAACATTGACAATTCTTGAGGTTCTTGAGGGTCTTGTTCTCTCAGCTCATGAACTTCACCAGCTGTTGATGACTACATCAAAGAGCACACAGAAATCAAAAGATATAGATAAAAATGAGGTGCAAAGAGATCCATCGAGAAAGAAAAGAAAAATGGCATCATCAAGCTCTTACTCATCTCCTTGCGCTGCCTGCAAATTCCTGAGAAGAAAATGCATGCCAGGTTGCATTTTCGCGCCTTACTTCCCACCAGAGGAGCCTCAAAAATTCGCCCACGTGCACAAAATCTTCGGTGCCAGCAACGTCACAAAGCTCCTCAACGAGCTCCTTCCTCACCAGAGAGAAGATGCCGTCAACTCTCTCGCCTACGAAGCAGAGGCTCGCGTGAGAGACCCAGTTTATGGCTGCGTCGGTGCCATCTCCTTCCTTCAGAGACAGGTTCAGAGGCTTCAGAAGGAGCTCGACGCTGCTAATGCCGATCTTCTCCGTTATGCCTGCAACGAGATCCCTCCGGCGAATTCTCTCTCCATGGTGCCACCTGGTTTAGGAATCACACCTTCATCGCTTCAAGTTCAACAACTTCCTCAGAGGCCAAGGTCGACGACTATGGAGTATATCAATGGAAGAATCAGCAGTACTGAAGGTGGAGGTGGTGGGTTGTACAGGCAATTCCCTACTTCTTATAATTACTCCCTTCCTTATACTATTCCATGGGCTGATACAGCTTCTGACCATGGCATCGACGAGGGAGCTGCAGGAGGTGGTGGAGGTAATTTGTAA 846 0.4728 MIQYDLDMKREFLALLEPSNCSLTLTILEVLEGLVLSAHELHQLLMTTSKSTQKSKDIDKNEVQRDPSRKKRKMASSSSYSSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFAHVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYACNEIPPANSLSMVPPGLGITPSSLQVQQLPQRPRSTTMEYINGRISSTEGGGGGLYRQFPTSYNYSLPYTIPWADTASDHGIDEGAAGGGGGNL 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0968 281 ProSiteProfiles LOB domain profile. 82 183 IPR004883 -
Lele20g0968 281 Coils Coil 162 189 - -
Lele20g0968 281 MobiDBLite consensus disorder prediction 53 73 - -
Lele20g0968 281 MobiDBLite consensus disorder prediction 49 80 - -
Lele20g0968 281 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 81 210 - -
Lele20g0968 281 Pfam Lateral organ boundaries (LOB) domain 83 180 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0968 Lele-ChrLele20 15759319 15762673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0968 75 268 AS2 family AT5G63090 60.914 6.95e-75 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele20g0968 LOB 1.8e-41 No_clan