Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0957 ATGAAGAAGCATATATTGGTCAGAGAATATTCCACAATGGGTAGTCTTTGGATATGCCATTTCTTTCTTTTGTTTCTGACCATGCTGAATGATTCTTTCGTCGTCACAGTTCTTGGAGACAATGCCTCAGATTCCTACTGGCTTCTTAAAATGAAATCTGAAATGGTTGACCCATTCGGAGCTCTCAAAGATTGGTCTCCAATGGTTCCTATGAGTAGCTGGTATGGAGTAACATGTTCACTTGATCAATCTCATGTTGTAGGCCTGAACTTGTCTGGTTCAGGAATATCTGGTTCCATGCCAATTGAGCTCAGCCACATCACTTCTCTTCAAACACTTGATTTGTCTTCAAATTCCCTCACCGGCTCTATTCCTTCTGAGATTGGGATACTGCAGAATCTAAGAATACTTCGACTGTTCTCAAATCATCTATCTGGCACCATTCCTGCAGAGATAGGTAATTTGAAGAAGTTAGAGGTTCTGAGAATAGGAGACAACTTGTTGACAGGTGAAATCACACCAAGTATTGGTAACCTGAAAGAGCTGAAAGAGTTGGGTTTAGCTTTCTGCTTTTTTAATGGAAGCATACCCACTGAGATTGGAAGCTTGAAGAACCTAGTTTCTCTTGATCTGCAGACGAACAATCTAGAGGGCCACATACCCAAAGAAATTCAAGGCTGTGAAAAGCTGCAAAATTTTGCAGCATCAAACAACTTGCTTGAAGGAGACATACCTTCTTTGGGGTCTCTTGTATCGTTGCAAATTCTGAACCTAGCCAATAATAGTCTCTCTGGGTCAATTCCCTCTAGCTTGAGCCTTCTCTCCAAGTTGAAATACTTGAATTTGCTTGGAAACAAACTAAGTGGGGCAGTTCCTTCAGAACTTAACAGTTTGGCTCAGCTTCAGAAGCTAGACTTGTCCAAAAACAACCTTTCTGGACCAATAAACGTCGTTAATTCCGAACTAAAGAGTCTCCAAACTCTGGTTCTATCTGATAATTTTTTGACAGGTAATATTCCAGCCAACTTCTGCTTCAGTAGTTCCAAACTTGAGCAACTTTTCTTAGCTCGGAATGAACTTTCTGGTGAGTTCCCCTTGCAGTTACTCAGTTGCTCCTCACTTCAGCAATTGGACCTTTCTGATAACAGCTTTGAAGGTGAACTGCCGACAACCTTGGACAAACTGCAGAACCTCACAGATCTTGCTCTCAACAACAACAGCTTCACAGGATCTCTACCTCCCGAAATTGGAAACATTAGTACCTTGGAGGGCCTGTTCTTGTTTCACAACATGTTTACAGGAAAAATCCCAGTGGATTTTGGAAGGCTTCAGAGGTTGAAAACCCTATACCTTTATGATAACCAGATGTCTGGTCCAATACCAAGAGAGCTAACAAACTGCACAAGCTTAAGGGAAATTGACTTCTTTGGGAACTATTTTTCTGGGCCCATTCCAGAGACCATAGGTAAGCTCAAGGACTTGGTTCTGCTTCATCTGAGGCAGAATAACTTGTGGGGTCCTATACCTCCAAGTATGGGGTACTGTAAAAGTCTTCAGTTATTGGCTTTAGCAGATAATAAATTGTCTGGTTCCATACCACCAACATTTAGTTACCTTTCAGAACTTAGAACCATTACCCTTTACAATAACTCTTTAGAAGGACCACTTCCAGAGTCACTCTTTCTTCTCAAAAACCTCAAAATCATAAATTTTTCTCATAACAGGTTCAGTGGAACTATCCTTCCTCTCACTGGTTCACATTCTCTAAATGCTTTGGACTTGACTAACAACAGCTTCTCAGGTTCCATCCCTTCAAGCTTAGCCATGTCAAGAAATCTCAGCCGTCTAAGACTTGCACATAACCAACTGACAGGGAGCATTCCATCTGAATTTGGTCATCTCAATGAACTCAACTTTCTTGATTTGTCTTTTAACAATTTGACAGGAGAAGTGACACCTCAACTGTCAAACTGTAAAAAGATCCAACACTTTCTACTTAGTAATAACAGATTGAGAGGGAAAACGCCTTCTTGGTTGGGAAGTTTGCAAGAACTTGGTGAGCTTGATCTCTCATTCAATGACTTCCATGGAAGCTTACCTTCTGAGCTGGGAAACTGTTCAAAATTGCTGAAGCTTTCTCTGCATCACAACAATCTCTCTGGTGAAATACCACAAGAGATTGGAAATCTGACTTCCCTCAATGTCCTTAACTTGGAAAGCAATAATTTCTCAGGCGTCATTCCTTCATCCATTCAGCAATGCAAGAAGCTATATGAGCTCAGTCTCTCAGAAAACCTCTTCAGAGGTGATATACCAGATGAGCTTGGAGGACTTACAGAACTCCAAGTGATATTGGACTTGAGCAAAAACCTCTTATCTGGGAAAATCCCATCATCGCTTGGAAACCTCATGAAGCTAGAAAGACTCAATCTTTCCTTTAATAATCTTCAGGGACAAGTTCCTCCTTCTCTGGGAAAACTAACAAGCCTGCACGTGCTGAATATCTCGTACAACCATCTCCAAGGCCAGATTCCTTCAACATTCTCAGGGTTCCCACTAAGCTCCTTCATGAACAATGACCACATGTGTGGCCCACCATTTGCATCGTGCTCAGGATCTAAAGGGCAAGATCAAGTGGTGCTGTCTAACAAAGCAGTGGCTGCGATCATAGTGGCCATTGTCTTTACTTCTACTTTGATATGCTTAGTGTTGCTGTATATTATGGCGAGAATTTGGTGTAACTGGAGGAAAGTTGCAATTTCAAGTGCAGAAGGAGGCATGGGAGAGCGAAAGAAAGAGAAAGCTAGATGGATCTATAATAGTGATAAGAAAACCAGAAATGGAGAGTATTGGAATATGAACACTTTTGGGTTTAGTCCTTCACCGGATAAGCAGAGTCCAGAATCATCGGCTTGTGTTTTCAATCTTAAAATGAAAGCAGAAGCAATGGAAAATTCCTTGGTTTGA 2967 0.4132 MKKHILVREYSTMGSLWICHFFLLFLTMLNDSFVVTVLGDNASDSYWLLKMKSEMVDPFGALKDWSPMVPMSSWYGVTCSLDQSHVVGLNLSGSGISGSMPIELSHITSLQTLDLSSNSLTGSIPSEIGILQNLRILRLFSNHLSGTIPAEIGNLKKLEVLRIGDNLLTGEITPSIGNLKELKELGLAFCFFNGSIPTEIGSLKNLVSLDLQTNNLEGHIPKEIQGCEKLQNFAASNNLLEGDIPSLGSLVSLQILNLANNSLSGSIPSSLSLLSKLKYLNLLGNKLSGAVPSELNSLAQLQKLDLSKNNLSGPINVVNSELKSLQTLVLSDNFLTGNIPANFCFSSSKLEQLFLARNELSGEFPLQLLSCSSLQQLDLSDNSFEGELPTTLDKLQNLTDLALNNNSFTGSLPPEIGNISTLEGLFLFHNMFTGKIPVDFGRLQRLKTLYLYDNQMSGPIPRELTNCTSLREIDFFGNYFSGPIPETIGKLKDLVLLHLRQNNLWGPIPPSMGYCKSLQLLALADNKLSGSIPPTFSYLSELRTITLYNNSLEGPLPESLFLLKNLKIINFSHNRFSGTILPLTGSHSLNALDLTNNSFSGSIPSSLAMSRNLSRLRLAHNQLTGSIPSEFGHLNELNFLDLSFNNLTGEVTPQLSNCKKIQHFLLSNNRLRGKTPSWLGSLQELGELDLSFNDFHGSLPSELGNCSKLLKLSLHHNNLSGEIPQEIGNLTSLNVLNLESNNFSGVIPSSIQQCKKLYELSLSENLFRGDIPDELGGLTELQVILDLSKNLLSGKIPSSLGNLMKLERLNLSFNNLQGQVPPSLGKLTSLHVLNISYNHLQGQIPSTFSGFPLSSFMNNDHMCGPPFASCSGSKGQDQVVLSNKAVAAIIVAIVFTSTLICLVLLYIMARIWCNWRKVAISSAEGGMGERKKEKARWIYNSDKKTRNGEYWNMNTFGFSPSPDKQSPESSACVFNLKMKAEAMENSLV 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0957 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 41 198 - -
Lele20g0957 988 ProSiteProfiles Leucine-rich repeat profile. 252 274 IPR001611 GO:0005515
Lele20g0957 988 SUPERFAMILY L domain-like 345 669 - -
Lele20g0957 988 FunFam Uncharacterized protein 389 484 - -
Lele20g0957 988 PRINTS Leucine-rich repeat signature 298 311 - -
Lele20g0957 988 PRINTS Leucine-rich repeat signature 110 123 - -
Lele20g0957 988 SUPERFAMILY RNI-like 591 848 - -
Lele20g0957 988 SMART LRR_typ_2 778 803 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 539 563 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 322 346 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 131 155 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 682 706 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 491 515 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 443 467 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 611 633 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 634 658 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 250 274 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 203 226 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 298 320 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 107 129 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 730 753 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 827 850 IPR003591 -
Lele20g0957 988 SMART LRR_typ_2 395 419 IPR003591 -
Lele20g0957 988 Gene3D Ribonuclease Inhibitor 290 388 IPR032675 -
Lele20g0957 988 Gene3D Ribonuclease Inhibitor 195 289 IPR032675 -
Lele20g0957 988 Gene3D Ribonuclease Inhibitor 389 484 IPR032675 -
Lele20g0957 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 292 388 - -
Lele20g0957 988 PANTHER POLYGALACTURONASE INHIBITOR 1 769 852 - -
Lele20g0957 988 Pfam Leucine Rich Repeat 829 851 IPR001611 GO:0005515
Lele20g0957 988 Pfam Leucine Rich Repeat 805 827 IPR001611 GO:0005515
Lele20g0957 988 Pfam Leucine Rich Repeat 109 127 IPR001611 GO:0005515
Lele20g0957 988 FunFam Uncharacterized protein 199 286 - -
Lele20g0957 988 Gene3D Ribonuclease Inhibitor 41 194 IPR032675 -
Lele20g0957 988 Gene3D Ribonuclease Inhibitor 485 582 IPR032675 -
Lele20g0957 988 ProSiteProfiles Leucine-rich repeat profile. 109 131 IPR001611 GO:0005515
Lele20g0957 988 SUPERFAMILY L domain-like 68 386 - -
Lele20g0957 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 485 581 - -
Lele20g0957 988 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 582 874 - -
Lele20g0957 988 Pfam Leucine rich repeat N-terminal domain 42 80 IPR013210 -
Lele20g0957 988 Gene3D Ribonuclease Inhibitor 583 879 IPR032675 -
Lele20g0957 988 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Lele20g0957 988 Pfam Leucine rich repeat 732 792 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0957 Lele-ChrLele20 15676852 15679818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0957 57 871 Receptor kinase-like Gene Family AT5G46330 34.345 8.21e-127 412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele20g0957 20 15676852 15679818 Lele21g1781 21 25490478 25493579 CCT
Lele20g0957 20 15676852 15679818 Lele22g1757 22 22830211 22833329 CCT
Lele20g0957 20 15676852 15679818 Lele23g0226 23 1550192 1557436 CCT
Lele17g1060 17 21145261 21148227 Lele20g0957 20 15676852 15679818 hybridization
Lele18g0479 18 2816016 2818970 Lele20g0957 20 15676852 15679818 hybridization