Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0947 ATGCAGAGCTCAGCCTTCACTCTCTCCCCTTCTCTTCCTCTTCTCAAGTCTCGTTCTCGCACTCCTTCTCGCTTCAATCCCATACGCCTCTCTGCTTCTCCCTCTTCCAAACCCAATGTCGCTTGCTCCTCCCCTCCTTCCGCTCGCCGATCCTGGTCCCTTGCTTCTTCTTCATCATCCCCTTTTCCCTTCAGACCCTGGACATCTTTCACCACCCTCTCTTCCTCCGATCACGATGGATCTCCTTTTCAGGCCAGGGCCACTTCCGTACCTCAGAGCAGCAGTGAATCATCCAATAATATGGCCAACACGTTGGTGCTCGGATCCTTGTTTGGTTTCTGGTACCTCTTCAATATCTACTTCAACATCTACAACAAGCAGGTCTTGAAGGCGTTCCATTTCCCAGTCACCATCACTGCAATTCAATTTGCTGTTGGGACTGTACTTGTATTATTTATGTGGAGTTTCAATCTATATAAAAGACCTAAAATCAGTGGTGCTCAGCTTGCTGCAATAGTTCCACTAGCTTTGGTACATACCTTAGGGAACCTTTTCACAAATATGAGTCTTGGAAAGGTAGCCGTGTCTTTCACTCACACAATCAAAGCAATGGAGCCCTTCTTCTCAGTGATCCTTTCTGCTATGTTCCTTGGAGAGTTCCCTACACCTTGGGTAGTTGCTTCCCTAATGCCCATTGCTGGTGGAGTGGCACTTGCATCAGTTACTGAGGCCTCCTTCAATTGGGCTGGATTCTGGAGTGCAATGGCATCTAATTTGACAAATCAGTCTCGCAACGTTCTCAGCAAAAGAGTCATGGTTAAGAAAGATGATTCTATGGACAATATAACGCTATTCTCAATAATAACTGTTATGTCCTTCTTCATGTTAGCCCCAGTGGCTGTATTCATGGAGGGTGTTAAAGTTACCCCTGCTTATCTGCAATCTGCGGGGTTGAATGTGAAACAAATATACATCAGATCACTCCTTGCTGCACTGTGTTTCCATGCATATCAGCAGGTTTCTTACATGATATTACAAAGGGTGTCACCTGTTACCCACTCTGTGGGTAATTGTGTCAAGCGGGTTGTGGTCATTGTGAGCTCTGTCATCGTCTTCCAAACACCTGTTTCACCCGTTAACGCTTTTGGGACTGGCATTGCTCTTGCCGGCGTTTTCCTCTATTCAAGGGTGAAGCGAATTAAGCCAAAGGCCAAGACAGCGTAA 1224 0.4641 MQSSAFTLSPSLPLLKSRSRTPSRFNPIRLSASPSSKPNVACSSPPSARRSWSLASSSSSPFPFRPWTSFTTLSSSDHDGSPFQARATSVPQSSSESSNNMANTLVLGSLFGFWYLFNIYFNIYNKQVLKAFHFPVTITAIQFAVGTVLVLFMWSFNLYKRPKISGAQLAAIVPLALVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEFPTPWVVASLMPIAGGVALASVTEASFNWAGFWSAMASNLTNQSRNVLSKRVMVKKDDSMDNITLFSIITVMSFFMLAPVAVFMEGVKVTPAYLQSAGLNVKQIYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIVFQTPVSPVNAFGTGIALAGVFLYSRVKRIKPKAKTA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0947 407 MobiDBLite consensus disorder prediction 78 99 - -
Lele20g0947 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 319 399 - -
Lele20g0947 407 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 105 405 IPR004696 GO:0016020|GO:0022857|GO:0055085
Lele20g0947 407 Pfam Triose-phosphate Transporter family 106 395 IPR004853 -
Lele20g0947 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 150 241 - -
Lele20g0947 407 MobiDBLite consensus disorder prediction 16 45 - -
Lele20g0947 407 PANTHER SOLUTE CARRIER FAMILY 35 107 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0947 Lele-ChrLele20 15619035 15622137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0947 1 407 Antiporters AT5G33320 72.397 0.0 559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1049 17 21085613 21088710 Lele20g0947 20 15619035 15622137 hybridization