Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0945 ATGGAAGAAAGATTTGTTCCCTTTGAAGGGATCAAGAATGACCTCAAAGGAAGAATTGCGTGTTACAAAGAAGATTGGACAACTGGTTTCCGAGCTGGTATCAGGATTCTTGCTCCAATCACATACATATTTTTTGCATCAGCAATTCCAGTTATTTCTTTTGGGGAGCAACTGGATAGAAATACAGATGGAACTCTGACTGCAGTGCAGACTCTTGCATCAACAGCTCTCTGTGGTGTTATCCATTCAATCTTTGGAGGGCAACCTCTCCTCATTCTTGGTGTAGCTGAGCCGACAGTTCTAATGTATACCTTCATGTATAATTTTGCCAAGGATCGAAAGGATTTGGGTCACAAACTCTTCCTTCCTTGGACTGGATGGGTGTGTGTTTGGACAGCCTTGTTGCTCTTTTTGTTGGCCGTTCTTGGTGCATGCTCCATAATCAACAGATTCACACGCATTGCTGGGGAATTATTTGGTCTGCTCATTGCAATGCTCTTTATGCAGCAGGCCATAAAGGGAGTTGTGGAAGAGTTTGGTGTACCCAAGAACCAGAGAGAAGGTACCAGTTCGATAGCCCTTGAACCATCTTGGCTGTTTGGCAATGGCATGTTTGCTTTGGTTTTGTCATTTGGCCTTATTTTTACAGCACTGAAAAGTCGTAAAGCTAGATCCTGGCACTATGGGACAGGTTGGCTTAGGGGAGTTATAGCCGATTATGGAGTCCCACTATTGGTGCTAATGTGGACTGCTGTATCTTACATACCAGTCAACGAGGTCCCAAAGGGGGTCCCTAGGCGACTATTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACAGTTATCACGGAAATGTTGGATGTTCCTACTGTGTATATTTTTGGAGCATTTATACCAGCAACTATGATTGCTGTACTTTACTACTTTGATCACAGTGTTGCGTCACAACTTGCACAGCAGAAGGAGTTCAATCTAAGAAAACCTTCTTCCTATCATTATGACCTTCTTCTTTTGGGATTTTTGGTTAGTCATTTAATTGAAATAATAAGTTTTATTGCAATTCCTGTTGACAGCAAAGAATATTCTCTATGTTACAGCCAGTTGTACCAGAATATGCAAGCAGCATATGATGAAATGCACACTCCATTGGTCCACCAAATGCCACCTGCACTGGTAAACAGGTTAAAAGAGCTGAAGGAGTCCACCATCCAACTTGCTTCTAGTCAAGGATACGTTGATGCCCCTGTTGACGAGATTGTGTTTGATGTGGAAAAGGATGTTGATGATCTTTTGCCTGTTGAAGTTAAAGAACAGCGCCTCAGCAATCTGCTGCAAGCATTGATGGTTGGTGGTTGTGTTGCTGCTATGCCTGTTCTGAAGAAGATACCAACTTCAGTCCTATGGGGCTACTTTGCTTTCATGGCTATAGAGAGTCTGCCAGGAAATCAGTTTTGGGAGAGAATATTGTTTCTGTTGACTGCTCCAAATCGAAGATACAAGGTGCTGGAGAAAATGCATGCAACTTTTATTGAGACTGTGCCCTTCAAAACAGTTGCTATGTTTACCTTGTTCCAAACGGCTTACTTGCTTGCATGCTTTGGTATAACTTGGATACCAATTGCGGGGGTCCTTTTCCCGTTGTTAATCATGCTTCTTGTCCCAGCACGCCAATATGCCCTTCCTGTGTTTTTTAAAGGAGTACATCTTCAAGAGTTGGATGCTGCAGCCTACGAGGAAGCCCCTGCTGTTTCTTTCAACATGCCATTTGAAGTCAGGATATTTCATGTTGATGAAAACATGATATTTGACCTATCTGCGTTGGTTAAATGTTATGTTCCTTACAATGCAAGAAAGGGGTTTAGAAACAAAGAGTCTATGTGCTTTGATATTACTGTTTCTGGTGAGATGAAGTCGCCTATAAACGATGAGGAACGTAAAGATCTTGACGAACCAAGAGTATTATTTTGA 1977 0.4229 MEERFVPFEGIKNDLKGRIACYKEDWTTGFRAGIRILAPITYIFFASAIPVISFGEQLDRNTDGTLTAVQTLASTALCGVIHSIFGGQPLLILGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCVWTALLLFLLAVLGACSIINRFTRIAGELFGLLIAMLFMQQAIKGVVEEFGVPKNQREGTSSIALEPSWLFGNGMFALVLSFGLIFTALKSRKARSWHYGTGWLRGVIADYGVPLLVLMWTAVSYIPVNEVPKGVPRRLFSPNPWSPGAYSNWTVITEMLDVPTVYIFGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLVSHLIEIISFIAIPVDSKEYSLCYSQLYQNMQAAYDEMHTPLVHQMPPALVNRLKELKESTIQLASSQGYVDAPVDEIVFDVEKDVDDLLPVEVKEQRLSNLLQALMVGGCVAAMPVLKKIPTSVLWGYFAFMAIESLPGNQFWERILFLLTAPNRRYKVLEKMHATFIETVPFKTVAMFTLFQTAYLLACFGITWIPIAGVLFPLLIMLLVPARQYALPVFFKGVHLQELDAAAYEEAPAVSFNMPFEVRIFHVDENMIFDLSALVKCYVPYNARKGFRNKESMCFDITVSGEMKSPINDEERKDLDEPRVLF 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0945 658 Pfam HCO3- transporter family 204 358 IPR011531 GO:0006820|GO:0016020
Lele20g0945 658 Pfam HCO3- transporter family 436 526 IPR011531 GO:0006820|GO:0016020
Lele20g0945 658 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Lele20g0945 658 PANTHER ANION EXCHANGE PROTEIN 3 584 IPR003020 GO:0005452|GO:0006820|GO:0016020
Lele20g0945 658 Gene3D Helical hairpin bin 18 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0945 Lele-ChrLele20 15608108 15612983 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0945 1 590 Antiporters AT3G62270 71.359 0.0 901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele20g0945 20 15608108 15612983 Lele21g1794 21 25604209 25605059 CCT
Lele20g0945 20 15608108 15612983 Lele23g0214 23 1431564 1432930 CCT
Lele17g1047 17 21074103 21078241 Lele20g0945 20 15608108 15612983 hybridization
Lele18g0490 18 2897134 2901344 Lele20g0945 20 15608108 15612983 hybridization