Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0932 ATGGAAGGTAGTGGACATGAATATAAGAAGGGCCTGTGGAATTCTCAGGAAGATAAGATCTTAATAGACTACGTGAAGCAGCATGGAGTAGGCAAGTGGAACCGTATCGCTAAAGTCACAGGATTGAAGAGATGTGGCAAAAGTTGCAGACTGAGGTGGATGAACTACCTGAGCCCTAATGTGAAGCGTGGAGATTTCTCAGAGGAAGAAGACGACCTCATTATTCGCCTCCACAATCTCCTTGGAAATAGGTGGTCATTGATAGCAGGGAGGGTGCCAGGTAGAACAGACAACCAAGTGAAGAATTACTGGAACACTCATTTGAGCAAAAAGTTGGGTGTTAACAAAAAGGAAAAGACCAAAGTGTGTCAACCTCCGAAGTCGCCCTCTACTGAATTTAAGCACGTCGCTTCTAACAAAGGGTCAAAAACTGATAATGGGGCTTCAAACTGTAGCCAAGAGGGTGAGATTGAGAAGTTCCTCCAAGATAATTCTTTAAGCAAGGAGATCATTATGAGTGATGATGATTTTGAGACCAACTTGTTTGCTAACAATGGAATTGGCCTTTATGATCCTTCCTCCTTCACTGAGACTTTCCAAGACTACTTTGTTGACCTGGATTGGCCTGCCTTGTAA 636 0.434 MEGSGHEYKKGLWNSQEDKILIDYVKQHGVGKWNRIAKVTGLKRCGKSCRLRWMNYLSPNVKRGDFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNYWNTHLSKKLGVNKKEKTKVCQPPKSPSTEFKHVASNKGSKTDNGASNCSQEGEIEKFLQDNSLSKEIIMSDDDFETNLFANNGIGLYDPSSFTETFQDYFVDLDWPAL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0932 211 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Lele20g0932 211 MobiDBLite consensus disorder prediction 124 152 - -
Lele20g0932 211 SMART sant 9 59 IPR001005 -
Lele20g0932 211 SMART sant 62 110 IPR001005 -
Lele20g0932 211 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Lele20g0932 211 FunFam Transcription factor WER 64 138 - -
Lele20g0932 211 CDD SANT 66 108 IPR001005 -
Lele20g0932 211 Gene3D - 65 145 - -
Lele20g0932 211 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Lele20g0932 211 MobiDBLite consensus disorder prediction 116 152 - -
Lele20g0932 211 CDD SANT 13 57 IPR001005 -
Lele20g0932 211 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 57 IPR017930 -
Lele20g0932 211 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 7 152 - -
Lele20g0932 211 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Lele20g0932 211 Gene3D - 10 62 - -
Lele20g0932 211 FunFam MYB-related transcription factor 9 62 - -
Lele20g0932 211 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Lele20g0932 211 Pfam Myb-like DNA-binding domain 63 108 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0932 Lele-ChrLele20 15552025 15552857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0932 2 147 MYB Transcription Factor Family AT5G40330 65.541 5.02e-67 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele20g0932 Myb_DNA-binding 9.2e-16 CL0123