Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0931 ATGGGTACATTCTTTCATATCTCTTCCAGTTTGCGAGGCAGATCCCATGAGTACCTTGTCATTATTACAGAAATGGAGGAAATTGAACTAGCTGAAGATGCAGTGGATCTTTTACTTCTGCATTCATGGCTTATTAGCTGTTTGATATTGGTTCTCCCTGTTAATTTGGTTTCTGAAGAAGTAAAGATGCCAGGAATCCTTACCAATGGATTTGAACATAATGAAAGAGCAAATGAAATGAACGGAAATCCTTCACCTCGTAAGGAAACTGCTACTCCAATCAAGCCCCAAAGGAGTTCCGTTAGTCCACGAAGTCCTCAAAACACAGGTCCAAATGCACCTGATCTACCTGTTGACACCTCAATCGAGCAGCTCTATGAAAATGTCTATGACATGGAAAGTTCTGATCACTCACCTTCCAGACATCGTCTCGGATCTGATGGAGATGAGTCTGGGATCGATTCAGAATTATGCCATCTAGTTGGAGGACCGATGAGGGAAATGGAAATAATGGAAGAGGAAGTGGCCGAGAGGTCCAGAAGTGATTCCGTTAGTGAAACATCGTCTGGAAAAGAAACATCAGAGAATCGTGAGAAGTTGGTATCAGCGGAAGATGAGAAGATTCAATGTGAGATGTTGGTACAGGCGGATGAGAAGATTCAATCTGCTAGTACAAGTTCTGCTTCTTCAGAAAATTCAAACAAAGTGTCAAAGTCACAGGTGGACCTTATACCTAAAACACCGCCAAAGTCGAAACCCAAGGGAAAAAGTCCTCCCACCAAGCCTCCTCCTGATAAGAGGAATGATAAACCTCTGAGAAAACAAAATAATGGAGCTACTCGTGTGAAAAAATCAAAGAATTCTCCAAGTAGAAGGTTAATGTCACAAAATCAGAGAAAGAATTCCACCGAGTCTACATCAGACAAACCAGAGATGGGGCCAGTTTTACTAAAGCAAGCAAGAGATTTGATTTCATCAGGAGATAATCCAAGGGTGGCTCTTGAATTAGCTCTTCGAGCAATGAGATTGTTTGAGAAGTGTTCTGATGGAAAACCAAGTTTGGAACTGGTTATGTGTCTGCATGTTACTGCGGCAATATATTCCAGCTTGGGCCAATACGATGAGGCAATCCCACTTCTTGAGCACTCCATTGAAATTCCTCTCATTGAGGAAGGGCAAGATCATGCCCTTGCTAAGTTTGCTGGTCACATGCAATTAGGTGACACCCATGCAATGTTGGGCCAGCCTGAAAACTCAATTATGTCCTATAAGACAGGCTTAGAGGTCCAGAGGAAAGTCTTAGGAGAAACAGACCCAAGATTTGGCGAGACTTGTAGGTATGTGGCTGAAGCACATGTTCAAGCGTTGCAATTCGACGAAGCTGAGCGGCTCTGCCAAATGGCTCTTGACATTCATAGAGCAAATGGTTCACCCCCTACTCTTGAAGAGGTGGCTGATAGGAGGCTCATGGGCCTCGTATATGAAACAAAAGGAAACCATGAAGCAGCTCTTGAGCATCTAATTCTAGCCAGCATGGCAATGGTAGCTAATGGCCAGGAAGTGGAAGTGGCATCCGTTGACAGCAGCATTGGTGACACATACTTATCTTTGTCTCGGTACGATGAAGCTATTTTTGCTTATCAGAAAGCACTCACAGTTTTTAAGACCAGTAAAGGAGAGAATCATCCAGCCGTAGGATCAATCTTCGTACGTATGGCTGACTTGTATAACAGGACAGGGAAAATAAGGGAATCAAAATCTTACTGTGAGAGTGCACTTAGAATCTATGAGAAACCTATGCCTGGGGTCCCTCCTGAGGAGATTGCAAGTGGTCTTATGGATATCTCAGCTATCTATGAGTCAATGAATGAGCTTGATCAGGCTCTCAAGTTACTTCCCAAGGCATTGGCAATATATAAGGACGCCCCTGGTCGGCAAAGCACAGTAGCAGGAATTGAAGCTCAGATGGGAGTCATGCACTACATGTTGGGAAACTATTCGGAATCTTATAAAACTTTAAAGAATGCTATCTCAAAGCTTCGTGCTACCGGAGAGAAGAAATCGGCTTTCTTCGCCGTCGCTCTTAATCAAATGGGACTTGCTTGCGTTCAGCGCTATGCATTGGGTGAGGCAACAGAACTGTTTGAGGAAGCAAAGAATATATTGGAACAAGAATATGGACCCTATCACCATGAAACGCTTGGGGTGTATAGCAATCTTGCTGGCATCTATGATGCAATAGGCAGGGTGGATGAGGCAATTCAAATTCTGGAGTATGTAGTTGGAATGAGAGAGGAAAAACTTGGGACAGCGAATCCTGATGTGGATGATGAGAAAAGAAGGCTGAGTGAATTGTTGAAGGAAGCTGGCAGAGTTAGGAGCAGAACAGCCAGATCACTTGAGACCCTTCTTGATGCCAACAATGCTCCTTCTAAAAACAGTAATCCACAAGGGGAGGCTATCTAG 2466 0.4371 MGTFFHISSSLRGRSHEYLVIITEMEEIELAEDAVDLLLLHSWLISCLILVLPVNLVSEEVKMPGILTNGFEHNERANEMNGNPSPRKETATPIKPQRSSVSPRSPQNTGPNAPDLPVDTSIEQLYENVYDMESSDHSPSRHRLGSDGDESGIDSELCHLVGGPMREMEIMEEEVAERSRSDSVSETSSGKETSENREKLVSAEDEKIQCEMLVQADEKIQSASTSSASSENSNKVSKSQVDLIPKTPPKSKPKGKSPPTKPPPDKRNDKPLRKQNNGATRVKKSKNSPSRRLMSQNQRKNSTESTSDKPEMGPVLLKQARDLISSGDNPRVALELALRAMRLFEKCSDGKPSLELVMCLHVTAAIYSSLGQYDEAIPLLEHSIEIPLIEEGQDHALAKFAGHMQLGDTHAMLGQPENSIMSYKTGLEVQRKVLGETDPRFGETCRYVAEAHVQALQFDEAERLCQMALDIHRANGSPPTLEEVADRRLMGLVYETKGNHEAALEHLILASMAMVANGQEVEVASVDSSIGDTYLSLSRYDEAIFAYQKALTVFKTSKGENHPAVGSIFVRMADLYNRTGKIRESKSYCESALRIYEKPMPGVPPEEIASGLMDISAIYESMNELDQALKLLPKALAIYKDAPGRQSTVAGIEAQMGVMHYMLGNYSESYKTLKNAISKLRATGEKKSAFFAVALNQMGLACVQRYALGEATELFEEAKNILEQEYGPYHHETLGVYSNLAGIYDAIGRVDEAIQILEYVVGMREEKLGTANPDVDDEKRRLSELLKEAGRVRSRTARSLETLLDANNAPSKNSNPQGEAI 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0931 821 MobiDBLite consensus disorder prediction 800 821 - -
Lele20g0931 821 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 113 807 - -
Lele20g0931 821 ProSiteProfiles TPR repeat profile. 524 557 IPR019734 GO:0005515
Lele20g0931 821 Gene3D Tetratricopeptide repeat domain 404 510 IPR011990 GO:0005515
Lele20g0931 821 MobiDBLite consensus disorder prediction 72 118 - -
Lele20g0931 821 Gene3D Tetratricopeptide repeat domain 685 797 IPR011990 GO:0005515
Lele20g0931 821 Gene3D Tetratricopeptide repeat domain 511 684 IPR011990 GO:0005515
Lele20g0931 821 MobiDBLite consensus disorder prediction 173 204 - -
Lele20g0931 821 MobiDBLite consensus disorder prediction 289 309 - -
Lele20g0931 821 MobiDBLite consensus disorder prediction 134 154 - -
Lele20g0931 821 SUPERFAMILY TPR-like 443 600 IPR011990 GO:0005515
Lele20g0931 821 SUPERFAMILY TPR-like 329 477 IPR011990 GO:0005515
Lele20g0931 821 Coils Coil 775 795 - -
Lele20g0931 821 MobiDBLite consensus disorder prediction 219 314 - -
Lele20g0931 821 Pfam Tetratricopeptide repeat 523 598 - -
Lele20g0931 821 Pfam Tetratricopeptide repeat 692 760 - -
Lele20g0931 821 MobiDBLite consensus disorder prediction 74 115 - -
Lele20g0931 821 Pfam Tetratricopeptide repeat 364 387 IPR019734 GO:0005515
Lele20g0931 821 SUPERFAMILY TPR-like 649 791 IPR011990 GO:0005515
Lele20g0931 821 SMART tpr_5 400 433 IPR019734 GO:0005515
Lele20g0931 821 SMART tpr_5 650 683 IPR019734 GO:0005515
Lele20g0931 821 SMART tpr_5 357 390 IPR019734 GO:0005515
Lele20g0931 821 SMART tpr_5 692 725 IPR019734 GO:0005515
Lele20g0931 821 SMART tpr_5 524 557 IPR019734 GO:0005515
Lele20g0931 821 SMART tpr_5 734 767 IPR019734 GO:0005515
Lele20g0931 821 SMART tpr_5 609 642 IPR019734 GO:0005515
Lele20g0931 821 SMART tpr_5 566 599 IPR019734 GO:0005515
Lele20g0931 821 SMART tpr_5 484 517 IPR019734 GO:0005515
Lele20g0931 821 SMART tpr_5 442 475 IPR019734 GO:0005515
Lele20g0931 821 Gene3D Tetratricopeptide repeat domain 191 403 IPR011990 GO:0005515
Lele20g0931 821 MobiDBLite consensus disorder prediction 132 157 - -
Lele20g0931 821 MobiDBLite consensus disorder prediction 259 276 - -
Lele20g0931 821 MobiDBLite consensus disorder prediction 219 241 - -
Lele20g0931 821 Pfam Tetratricopeptide repeat 612 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0931 Lele-ChrLele20 15541531 15544756 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1795 21 25607738 25610587 Lele20g0931 20 15541531 15544756 CCT
Lele23g0213 23 1427161 1428873 Lele20g0931 20 15541531 15544756 CCT
Lele24g1731 24 22577726 22582017 Lele20g0931 20 15541531 15544756 CCT
Lele17g1031 17 20960988 20970011 Lele20g0931 20 15541531 15544756 hybridization
Lele18g0503 18 2985795 2989542 Lele20g0931 20 15541531 15544756 hybridization