Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0924 ATGAAGGAGGGAAGCGAGGGGTTTGTGAGGGCCGATCAGATTGATCTTAAGAGCATAGATGAACAGCTAGAGAGACACATGAACAAGGCATTGACTATGGAGAAGAACAAGAGGAAAGAAGAAGATGATTTTGCTACTAATATTGTTATCAGCCCTAGGGCCATCAAACCTAAGGCTGGGCCCACCTTCAGGAAGCAAAGGCACGACTGGGAGATTGACCCTTCCAAGCTCATAATCAAATCAGTTATTGCTCGTGGCACTTTCGGCACCGTCCACCGCGGTGTCTACGATGGCCAAGACGTCGCCGTTAAATTGCTGGACTGGGGTGAAGAAGGCCAAAGGACAGAAGCTGAAATTGCTTCCCTTAGGGCGGCATTTATACAGGAAGTTGTTGTTTGGCATAAACTTGATCATCCCAATGTCACTAAGTTTATAGGAGCAACGATGGGTTCATCAGAACTACAGGTACAAACTGAGAATGGGCTAATAAGCATGCCCAGCAATATCTGTTGTGTTGTTGTGGAGTATCTTCCCGGTGGTGCACTGAAATCATACCTTATAAAAAACAGTAGAAGGAAGTTAGCTTTTAAGGTGGTCATCCAACTTGCACTAGATCTTGCGAGAGGGCTGAGTTATCTTCACTCTCAAAAAATTGTCCATAGAGATGTAAAGACAGAGAACATGTTATTGGATAAGTCACGCACAGTTAAAATTGCTGACTTTGGTGTTGCACGTGTTGAGGCATCAAATCCTAATGACATGACAGGGGAGACTGGTACGCTTGGTTACATGGCTCCGGAGGTGTTAAATGGCAAGCCCTATAACAGGAAGTGTGATGTGTACAGTTTTGGCATCTGTTTATGGGAGATATATTGTTGTGACATGCCATATCCTGACCTGAGTTTTTCAGAGATTACAACAGCCGTTGTTCGTCAGAATATGAGACCAGAGATACCAAGATGTTGCCCAAGTTCCCTAGCAAATGTAATGAAGAGATGCTGGGATGCCAATCCTGAAAAGCGACCCGAGATGGATGAGGCGGTTTCCTTGCTAGAAGTCATTGACACATCAAAAGGTGGAGGCATGATCCCCCGTGATGAACAGCAAGGTTGTCTTTGTTTCCGCAAGTTCAGAGGACCATGA 1143 0.4514 MKEGSEGFVRADQIDLKSIDEQLERHMNKALTMEKNKRKEEDDFATNIVISPRAIKPKAGPTFRKQRHDWEIDPSKLIIKSVIARGTFGTVHRGVYDGQDVAVKLLDWGEEGQRTEAEIASLRAAFIQEVVVWHKLDHPNVTKFIGATMGSSELQVQTENGLISMPSNICCVVVEYLPGGALKSYLIKNSRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKSRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGKPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITTAVVRQNMRPEIPRCCPSSLANVMKRCWDANPEKRPEMDEAVSLLEVIDTSKGGGMIPRDEQQGCLCFRKFRGP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0924 380 PRINTS Tyrosine kinase catalytic domain signature 212 230 IPR001245 GO:0004672|GO:0006468
Lele20g0924 380 PRINTS Tyrosine kinase catalytic domain signature 322 344 IPR001245 GO:0004672|GO:0006468
Lele20g0924 380 PRINTS Tyrosine kinase catalytic domain signature 278 300 IPR001245 GO:0004672|GO:0006468
Lele20g0924 380 PRINTS Tyrosine kinase catalytic domain signature 174 187 IPR001245 GO:0004672|GO:0006468
Lele20g0924 380 Pfam Protein tyrosine and serine/threonine kinase 79 350 IPR001245 GO:0004672|GO:0006468
Lele20g0924 380 Gene3D Transferase(Phosphotransferase) domain 1 177 368 - -
Lele20g0924 380 SUPERFAMILY Protein kinase-like (PK-like) 60 352 IPR011009 -
Lele20g0924 380 Coils Coil 16 43 - -
Lele20g0924 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Lele20g0924 380 FunFam Kinase suppressor of Ras 1 66 161 - -
Lele20g0924 380 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 69 354 - -
Lele20g0924 380 FunFam Serine/threonine-protein kinase HT1 177 362 - -
Lele20g0924 380 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0924 380 Gene3D Phosphorylase Kinase; domain 1 66 160 - -
Lele20g0924 380 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0924 380 CDD STKc_MAP3K-like 83 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0924 Lele-ChrLele20 15500419 15503535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0924 1 312 MAP Kinase Kinase Kinase AT5G50000 81.132 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele20g0924 PK_Tyr_Ser-Thr 3.5e-63 CL0016