Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0922 ATGAATGAGATCTTCATCTCTCTGATTCTACTGTTTCTGGGTATAGCGGCTTTGGTGTTGATCCATGTGTTCGTTGTGGGGAGGGCTCTGCGCAGAAGAAATCATCAGGGTGGTAACGAAGAACAGAGCAATGGCGATTTTGATGGAATTGGGACGAAGAGAATGTCAAGTGAGGAGATGAAGGATCTGCCCTGTTTTGAGTATAAGGAAGCAGAGAAGGAAGGAGGAGGAGGAAGTAGCGGCACTGTGACTGGGGATTGTGCAGTTTGCTTAGAGAGCTTCAAGGATGGTGATATGTGCAGGTTTTTACCTAATTGCTCTCATAGCTTCCATGTCACCTGCATAGATTCATGGATTCTCAAAACACCCATTTGTCCGATTTGCAGAACCTGGGTTAACTCGCCGATGATTCCCACGGTTGTTACCGAACAGGTTGATGCTTCACAAACTGTTGTAATTGAGATTGTATAG 471 0.4544 MNEIFISLILLFLGIAALVLIHVFVVGRALRRRNHQGGNEEQSNGDFDGIGTKRMSSEEMKDLPCFEYKEAEKEGGGGSSGTVTGDCAVCLESFKDGDMCRFLPNCSHSFHVTCIDSWILKTPICPICRTWVNSPMIPTVVTEQVDASQTVVIEIV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0922 156 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 5 136 - -
Lele20g0922 156 Pfam Ring finger domain 86 129 IPR001841 -
Lele20g0922 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 135 IPR013083 -
Lele20g0922 156 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Lele20g0922 156 SMART ring_2 87 128 IPR001841 -
Lele20g0922 156 SUPERFAMILY RING/U-box 59 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0922 Lele-ChrLele20 15495347 15495817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0922 8 144 C3H Transcription Factor Family AT5G17600 31.544 2.03e-18 78.6