Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0915 ATGGGTCGAAATCGAAATCGAAAACGTATATGGGTACTCTTCATGGTGGTGTTTTCGTTTCTTCCAATGGTTTATACAGAGGATGAAGAAGTGAGGCAGGCAATGGTGAGATTCATGGAGAAACTTGATCCAACGAATACACCAAGAGATATGAACTGGGGTTGGAACTTATCTTCAGATCCTTGCATTGACGAATGGTATGGAATTCAATGTTATTCAGGAGCAAAATTTGTGAAGAATATAGTTCTTGAGGATTCTGGTTTCACAGGAACTTTAGACGCTGCTTCTCTCTGCACACTTCAGCTTCTTCAAGGCCTTAGCTTGAAGAACAACAGCTTACATGGCCTCATACCAGAAGAAATAGGAATGTGTAAAGCATTGAGACTTTTGTATTTAAGTGGCAACAATTTCTCCGGCGACCTTCCTCTTTCTGTTTCACAGATAGGTAATCTGAAAAGGATCGATGTTTCAGATAACAACTTCTCCGGTGACCTTCCTGATATGAGTCATATTACAGGGTTAGCATCATTTCGAGCTCATAATAACGAATTCACGGGGGAAATTCCCAACTTTGTTTTCTCCAACATGCAAGAGTTCAATGTCTCCAACAACAATTTACAGGGTCCAATTCCTGAATTGATAATAAGCTTGTTTGGAGCAGACAGCTTTTCTGGTAATCCCAACTTATGTGGACCCCCACTTGAAAACCTATGTCCTCAATTTCCTCCTCCTCCTCCTCCTGCAACACAAAAGAAGAAAAGCAGAAAATTTTTCAGTCGTAGATTGGCCATTTATTCTGGGTACGTGATTCTTGGTGTGGTTGTCCTGCTTTACTTGGCATTCAAGATTGTTAAGCGTTACAGAGTTAAAAAGGAGCCATTGAATACTGCTGAGAAGAAGGAAGTAATAACAGAGGAAGCTAGCAAGGAGGAGAAGGCTCTAGAACCTTCGAATGAAGTGAATGGGATTAATGTAACTAGATCAGAGTATTCAGTGTCATCTATTGAGACAGGGATGGTTTCATCAAATCTGGTTGTTCTTATGAGTCCAGTGGTGAGGACTCTGAAATTTGAGGATTTGTTGAGAGCTCCTGCAGAATTGGTAGGCAGAGGGAAGCATGGAAGCTTGTACAAGGTGATGCTGGGCAGTGGGGTGGTTTTAGCAGTGAAGAGAATCAAAGATTTGGGGATTTCAAAACAGGATTTTGACAATAGGATGCACAAGTTAAACCCAGTGAAACATCCCTGTGTTCTTCCTCTTCTTGCATTTTATTGCTCCCTTCAAGAGAAGCTTTTGGTGTATGAGTTTCTGCATAATGGTAGCCTCTTCAAGATGCTCCGTGGATCTCAAAGTGGGAAAACTATATTTGACTGGGGAAGCAGACTGAATGTTGCAACCAACATAGCAGAAGCCTTAGCCTACATGCACGAGGAGCTTCGTGAAAGTGGGATAGGTCACGGCAGCTTGAAATCCAGCAACATATTGTTCGACAAGAACATGGATCCACGCTTAAGCGAATATGGATTAATGGCGGTTGAAAATCAAGACAAATCTGTCTTCCGCAGCAAGAAGAACAAAAATAGCAGAAATCCCAGTTCTGGTGCCGCAGGAGCCGAAGCTTATAGCACCTTCAAGGTCGACACATATGCGTTTGGGGTGGTACTTCTTGAACTCTTAACAGGAAAAGTGGTTCAGAATAACAATAATGGATTTGATCTGGTTCGGTGGGTTAACTCAGTGGTGAGAGAGGAATGGACAGTGGAAGTATTTGACAAGTGTTTGACAACAGAGGAAGCTAATCAAGAGAGGATGATGAGTTTGTTGCAGATAGCTTTGAAATGTGTGAGTGATTATCCGAATGAGAGACCAAGTATGAGTGAAGTTGCAGTAATGACGATTTCTTTGAAAGAGGAAGAAGACAGATCCATAACTTTTAACCCATAA 1944 0.4172 MGRNRNRKRIWVLFMVVFSFLPMVYTEDEEVRQAMVRFMEKLDPTNTPRDMNWGWNLSSDPCIDEWYGIQCYSGAKFVKNIVLEDSGFTGTLDAASLCTLQLLQGLSLKNNSLHGLIPEEIGMCKALRLLYLSGNNFSGDLPLSVSQIGNLKRIDVSDNNFSGDLPDMSHITGLASFRAHNNEFTGEIPNFVFSNMQEFNVSNNNLQGPIPELIISLFGADSFSGNPNLCGPPLENLCPQFPPPPPPATQKKKSRKFFSRRLAIYSGYVILGVVVLLYLAFKIVKRYRVKKEPLNTAEKKEVITEEASKEEKALEPSNEVNGINVTRSEYSVSSIETGMVSSNLVVLMSPVVRTLKFEDLLRAPAELVGRGKHGSLYKVMLGSGVVLAVKRIKDLGISKQDFDNRMHKLNPVKHPCVLPLLAFYCSLQEKLLVYEFLHNGSLFKMLRGSQSGKTIFDWGSRLNVATNIAEALAYMHEELRESGIGHGSLKSSNILFDKNMDPRLSEYGLMAVENQDKSVFRSKKNKNSRNPSSGAAGAEAYSTFKVDTYAFGVVLLELLTGKVVQNNNNGFDLVRWVNSVVREEWTVEVFDKCLTTEEANQERMMSLLQIALKCVSDYPNERPSMSEVAVMTISLKEEEDRSITFNP 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0915 647 Gene3D Ribonuclease Inhibitor 194 235 IPR032675 -
Lele20g0915 647 Gene3D Ribonuclease Inhibitor 30 193 IPR032675 -
Lele20g0915 647 FunFam Nuclear pore complex protein NUP107 28 190 - -
Lele20g0915 647 Gene3D Transferase(Phosphotransferase) domain 1 437 643 - -
Lele20g0915 647 Gene3D Phosphorylase Kinase; domain 1 333 436 - -
Lele20g0915 647 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Lele20g0915 647 SUPERFAMILY Protein kinase-like (PK-like) 365 631 IPR011009 -
Lele20g0915 647 SUPERFAMILY L domain-like 47 234 - -
Lele20g0915 647 Pfam Protein kinase domain 366 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0915 647 ProSiteProfiles Protein kinase domain profile. 362 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0915 647 PANTHER OS05G0588300 PROTEIN 13 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0915 Lele-ChrLele20 15472393 15474818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0915 55 628 Receptor kinase-like Gene Family AT1G68400 35.048 4.38e-94 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele20g0915 Pkinase 3e-25 CL0016