Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0906 ATGGCGATCCGCGTTTTGGGCGCATTGGAGCCACTCATTAACGCGTTGGATTCCGAGTCGGAACGGACTCGGCACGACTCGGCGCTCGTGTTGTACCACCTGACCCTGGTCCAGAGCAACAGGGTGAAGCTGGTGAAGCTCGGGGTGGTGCCGGCGCTGCTATCAATGGTGAAATCGGGGTATTTGGCGAGCCGTGTTTTGCTGATTCTGTGTAATATAGCAGCGGCCACGGAGGGGCGAACGGCGATGCTGGACGCGAATGCGGTGGAGTGCTTGGTGGGTGTGCTGAGGGAGAAAAGGGGGGCCGAGGAGGAGGCGACGAGGGAACACTGTGTGGCTGCGTTGTATGGAATGAGCCATGGAAGCTTGAGAGTCAAGGCGTTGGCAGAGGGAGCTAGGGCTGTGGAGGTTTTGAGAGAGTTTGAAGAGAGAGGATCAGCGAGGGCGCGAGAGAAGGCCAAGAGGATGTTGCAGATGATGAGAGCTGGAGGAGGTGAGGATGACGGAAACGGCGTCGGTTCGGATGGGGCATTGGACTCGGGTGTGTTGGGTCGAACCCGGTTCCGAGTTGGAGGCGGAAGGAATGCGGACGCGGCTAACAACACCACGTTTTAG 615 0.5886 MAIRVLGALEPLINALDSESERTRHDSALVLYHLTLVQSNRVKLVKLGVVPALLSMVKSGYLASRVLLILCNIAAATEGRTAMLDANAVECLVGVLREKRGAEEEATREHCVAALYGMSHGSLRVKALAEGARAVEVLREFEERGSARAREKAKRMLQMMRAGGGEDDGNGVGSDGALDSGVLGRTRFRVGGGRNADAANNTTF 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0906 204 Gene3D - 1 164 IPR011989 -
Lele20g0906 204 PANTHER U BOX DOMAIN-CONTAINING 2 160 - -
Lele20g0906 204 SUPERFAMILY ARM repeat 3 162 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0906 Lele-ChrLele20 15422450 15423064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0906 1 204 U-box Gene Family AT5G65200 58.140 3.18e-71 224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1013 17 20853041 20854648 Lele20g0906 20 15422450 15423064 hybridization
Lele18g0526 18 3099914 3108619 Lele20g0906 20 15422450 15423064 hybridization