Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0897 ATGGCTAGTGATGTTCTCCGGCCCTGTTGCAGTTCCGGTGAGCTGCATGTTCTTGCCGTGGATGATAGTTATGTCGATCGAAAGGTCATTGAGAGATTGCTTAAAATTTCTTCTTTTAAAGTGACGGTTGTAGATAGTGGAACTAGAGCTCTTGAATATTTGGGATTGGATGGACAGAAGAGCTCCATTGGATTTGAGAGTGTCAAGGTTAATCTGATAATGACGGACTATTCAATGCCTGGGATGACTGGATATGAGCTGCTCAAGAAGATCAAGGAATCATCCAGTTTTAGAGAGATTCCAGTAGTAATCATGTCATCTGAGAATATCTTGACTCGAATTGATAGATGCTTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCAGTGAAGTTGGCAGATGTGAAACGATTGAAAGAATTCATAATGAAGGGTGAAGGAAAGGAAATTGGAGAGAGAGAATCTCACAAGAGAAAGAGATCAGATGATTGCAGTGAACTTCCACCAACTTCATTCTCATCTCTGTCTTGTCCTTGTGAACCATCATCTTCTTCACCATCTGCATTGTCCTCAAAGAAGCCTAGATTGCTAGCAGAGTTTACTAGTACTCTGTTGTCTGTTAGGGTCATATCCAAAGTTTCAATCTTGACACTTCAGAGTTCATCAATGTCTACCCCTAGTCATGCAATTGCAAGGGCTGTGGCTGTTACTGCAACTGTTGTGTTCTTAGTTTCTGGGATTTTGTTTTATTTGTTCTATAAGTTTGTTCTGTGTCGATACAGCCAAAGCCACAAGGGTGCTACTGCTATTCTGCGTGATAAAGGGGTGAAACATCAGGACATAGAGGAAGTTAGTGGCAAAGTGAAAGGATTGGTCGTTGAAGAAGATGGAACCCATATTCTTTACGTGTTGGAAGCAGATGGTAGACCAGTGAGAAGTAGATTCCCAAAATGTTGGTTTAATCCAAGTTATGAAAGTTCTGAAGAATTCATGAAAATAAATGTCAAACCAGTATCTTCCCCATTACCTACTCTGCCTTCTTCAGTTTCTGCATCATCACCTCTAAAGCCTGCTCCTCCAGCGCCACCGCCACCGCCACCTCCTCCGAGAGAGGAAATTACAAAGATGCCACCTAAGCCTCCAACACTACCACCTCCACCTCCAAAGGCATCATTGAGACCCCCACCTGCACCTAAAGGGAAAGCAAACATGGAGAACGGCAAAGAGGGAACCCTAGACAAGAGTTCAAGAGACAAAGATGGTGACACTAAAAGGTTGAAGCCTCTTCACTGGGATAAGGTTGCAGCCAATGTTGATCATTCAACAGTGTGGGATCAGATCAATGATGGCTCTTTCTTGTTTGATGATCAACTCATAGTAAAACTATTTGGATATTCAAGCAACAACAACAAAACCCAAGAAAGATACATGAATCTTTCGACCAATTCCAACTCCATTTCACCACCTCAAATATTCATTCTAGAGGCTAGAAAATCCCATAACACTACGATTGTGCTGAAGTCTTTAGCAATTTCTCGTGATGAAATCCTAGAAGCACTCCTTGATGGCCAAGGACTTAGTGCTGACACACTTGAAAGACTCACCAGATTAGCTCCAACTCAAGAAGAAACAGCCAAAATCATAAATTTCAATGGCGACCCAGATAAACTAGCAGATGCAGAATCAAACTATGATTCTGAAGCACTTCAGCTTAAAGAAAACCTGGGAACACTCGAAATGGGATGCAAGGAACTAAGGACTAGTGGTCTCTTTAGAAAACTCCTAGAAGCCATTCTCAAAGGTGGGAACAGAATGAATGCTGGAACTTCAAGAGGCAATGCACAGGGTTTCAACCTAAACTCTCTCAGCAAACTTTCTGACGTGAAAAGTACAGATGGTAAAACCAGTTTGCTTCACTTCATTGTGGAACAAGTGGTTCAGTCAGAAGGTAGAAGAGAAGCTTCGTATCAGAAGCAGAAGAACCTGACAGACAGAGAATATCTGACGCTTGGCTTACCAGTACTTGGAGGGCTAAGTGATGAGTTATCTGAAGTAAGAAAAGCAGCAAACATAGAACATCACAATTTCATCAGTTTGTGTTCAACTTTGCATGCTCATGTCACTGAAATTCGCCAGATTATGACATGTTGTAATAACGGTGATCAGAGAGATGGGTTTATTAAGGAAATGAAAGGGTTCTTAGAGGACTGTGAAGAGGAACTGAAGGTGGTGAAAGAAGAACGGGAAAGGATCATGGAGCTTGTAAAGAAGACGAACGAGTATTATCTATCAGGAGGAGGATCCAAAGACAGCATGATGTCAATCCCATTTCAGTTGTTCGTTATTGTAAAAAAGTTTGTTGACAAGATAGATCAAGCTTGCTTAGAACTCAAGAAGAAGATAGAAAAGAAGAACGTAGGAGGAGTAGAAGCTGTGTTATCAACAACATCATCACCATCAAAGAAGATGATGCCCACTCAGATTTCCAAACTTCAATTTCCATTTTGTGTCGAATATAACATAGTACTGGACGAAGATCGGATCAACAAAGCACTTTCTCTGTCCTTGAGGGCTCACAGATCACCAGAGAAACCATACCTTGTAGAGAAAGCGATTGGGAAGAAGAAGCAAATAATGTTTACAGGGCACTCCTCTAGTGCTGCAGTGGCCATTCTTGCAACCTTATGGGCATTGGACAAATACCTAACTCCAGGCAATAACCAGTTCCCTCCTGTGTGTCTCACTTTTGGGTCTCCCTTAATTGGTGAACTGAGAGAAAGCTTAAAAATGCAACATGTGGTTTACTTAGACCAACTAGAAAATTTGCCTTTGTCTGCTGATGGTCTGCATGGAGTTATTGCAGCAACCAACATGGCCTTGAATGACCTTGGACTTAGCGAAAGAGCTAGGCTGTGTCTTATGGCTGCTGGAGAGTTGGAGAAACAAAAAATCAGAAACGAGGAGCAAATTGACCTGGAGATAATAGAGGAAAATATGAACTGCCAGATGAATTTGAAGCCGAGAAAGAATGAATTGAGCGTGGAACCCAGTTCCGACGCCTGGTGGAGCCGCTGGATGTTGCCAACTATTACTGGCAACGAGGAACGACATGACAGGACCATACCTGGAAGGAAAAGGCAGGCCAAGGCGATAAAAATACACACAAAGATGGTTGGAACGTGCAGAGAGAAAGCCAGAAGGAGCATACTCAAGTCGTGCTTAATGGCGGAGGTGGAAGCGCTCTGGATCAAAAGTGAACAAGGGACGCCATTCGAACAAGTTAAGGAACGGGCTCTGAAACTTGAAGGAGATAAACGATGGAGTGAACAAGAGGTACTGTCCAACTATGTGTTGTTGGAGGGTTACCTTGTGAAGTGGTGGAACCGTCTTCCAAAGCAACACAAGGAAGGATCCTGCATAAGGAGTCTCATATTGAGGGATAATTGA 3447 0.4267 MASDVLRPCCSSGELHVLAVDDSYVDRKVIERLLKISSFKVTVVDSGTRALEYLGLDGQKSSIGFESVKVNLIMTDYSMPGMTGYELLKKIKESSSFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLADVKRLKEFIMKGEGKEIGERESHKRKRSDDCSELPPTSFSSLSCPCEPSSSSPSALSSKKPRLLAEFTSTLLSVRVISKVSILTLQSSSMSTPSHAIARAVAVTATVVFLVSGILFYLFYKFVLCRYSQSHKGATAILRDKGVKHQDIEEVSGKVKGLVVEEDGTHILYVLEADGRPVRSRFPKCWFNPSYESSEEFMKINVKPVSSPLPTLPSSVSASSPLKPAPPAPPPPPPPPREEITKMPPKPPTLPPPPPKASLRPPPAPKGKANMENGKEGTLDKSSRDKDGDTKRLKPLHWDKVAANVDHSTVWDQINDGSFLFDDQLIVKLFGYSSNNNKTQERYMNLSTNSNSISPPQIFILEARKSHNTTIVLKSLAISRDEILEALLDGQGLSADTLERLTRLAPTQEETAKIINFNGDPDKLADAESNYDSEALQLKENLGTLEMGCKELRTSGLFRKLLEAILKGGNRMNAGTSRGNAQGFNLNSLSKLSDVKSTDGKTSLLHFIVEQVVQSEGRREASYQKQKNLTDREYLTLGLPVLGGLSDELSEVRKAANIEHHNFISLCSTLHAHVTEIRQIMTCCNNGDQRDGFIKEMKGFLEDCEEELKVVKEERERIMELVKKTNEYYLSGGGSKDSMMSIPFQLFVIVKKFVDKIDQACLELKKKIEKKNVGGVEAVLSTTSSPSKKMMPTQISKLQFPFCVEYNIVLDEDRINKALSLSLRAHRSPEKPYLVEKAIGKKKQIMFTGHSSSAAVAILATLWALDKYLTPGNNQFPPVCLTFGSPLIGELRESLKMQHVVYLDQLENLPLSADGLHGVIAATNMALNDLGLSERARLCLMAAGELEKQKIRNEEQIDLEIIEENMNCQMNLKPRKNELSVEPSSDAWWSRWMLPTITGNEERHDRTIPGRKRQAKAIKIHTKMVGTCREKARRSILKSCLMAEVEALWIKSEQGTPFEQVKERALKLEGDKRWSEQEVLSNYVLLEGYLVKWWNRLPKQHKEGSCIRSLILRDN 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0897 1148 Gene3D - 15 171 - -
Lele20g0897 1148 MobiDBLite consensus disorder prediction 406 425 - -
Lele20g0897 1148 SUPERFAMILY alpha/beta-Hydrolases 873 925 IPR029058 -
Lele20g0897 1148 MobiDBLite consensus disorder prediction 150 179 - -
Lele20g0897 1148 SUPERFAMILY CheY-like 14 138 IPR011006 -
Lele20g0897 1148 MobiDBLite consensus disorder prediction 353 395 - -
Lele20g0897 1148 MobiDBLite consensus disorder prediction 341 425 - -
Lele20g0897 1148 MobiDBLite consensus disorder prediction 150 165 - -
Lele20g0897 1148 Pfam Lipase (class 3) 873 930 IPR002921 GO:0006629
Lele20g0897 1148 Pfam Formin Homology 2 Domain 562 789 IPR015425 -
Lele20g0897 1148 Pfam Formin Homology 2 Domain 419 563 IPR015425 -
Lele20g0897 1148 Coils Coil 727 754 - -
Lele20g0897 1148 CDD REC_typeA_ARR 17 138 - -
Lele20g0897 1148 Gene3D alpha/beta hydrolase 850 925 IPR029058 -
Lele20g0897 1148 ProSiteProfiles Formin homology-2 (FH2) domain profile. 416 816 IPR015425 -
Lele20g0897 1148 PANTHER FORMIN-RELATED 168 803 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele20g0897 1148 Pfam Response regulator receiver domain 17 135 IPR001789 GO:0000160
Lele20g0897 1148 Gene3D Formin, FH2 domain 437 808 IPR042201 -
Lele20g0897 1148 SUPERFAMILY Formin homology 2 domain (FH2 domain) 429 804 - -
Lele20g0897 1148 SMART REC_2 15 139 IPR001789 GO:0000160
Lele20g0897 1148 ProSiteProfiles Response regulatory domain profile. 16 143 IPR001789 GO:0000160
Lele20g0897 1148 SMART it6_source 416 805 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0897 Lele-ChrLele20 15373478 15381596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0897 230 807 FH2 protein (formin) Gene Family AT1G70140 35.364 7.33e-115 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele20g0897 FH2 5.4e-53 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1003 17 20808618 20810645 Lele20g0897 20 15373478 15381596 hybridization