Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0890 ATGTTGTCCACGTCTCAGAAGCAAAGCCTCCACCCCATCCTTTCTGCAAACCTTGGCAAGCTCACCTTACCTTCTTCTTCCTCCACCACTCACCATGATTTGGACTTTCCTCCTTTCTCTTCCCACGATCCCAATCCATCTCCACCCACTGCTATTCCTGGTAGCCCACAGGTTATTCAGAGAACTGATTGCGAAGTTGGCGAAAAGCAAGAAGTGTGTGTGAGTGATTCTGGAGAGCAATTGATCTGCAAAATTGGACCTGGGGATTTTCAAATTTTGAGAGTTGTCGGGCAGGGCGCTTTCGGGAAGGTCTTTCAAGTAAGGAAAAATAGCGATCGTTTGGATGGAGAGGGCGGCGGCGGTAATGGGGATGGCATTTTTGCAATTAAGGGTATCTTCAGTGAGGATCAGGCAAGGCTTTACACTGCTGAGATAGTATCTGCTGTTTCCCATCTTCACAAGTGTGGAATCGTGCATCGAGATCTTAAACCTGAAAATATACTTATGGACGCTGATGGGCATGTAATGTTAACTGATTTTGGATTGGCAAAGGAAATTGATGAATCAGGGAGATCTAACTCTTTATGTAGGACCACAGAATATATGGCTCCAGAAATCTTACTGGCTAGACCACAACAAGGAGGAAGATTGGTGGAGCGTTGTTCACAGTTGCTGCAAAAGGATCCATCAAAAAGGTTGGGCAATGGACCAAATGGAGACAGCCAGTTTAAAAGTCACAAGTGGATTCACTCAATCAATTGGAAGAAACTGGAGGCAAGAGAACTGCAGCCAAAATTCAAACCAGATGTGAATGGGTTAGACTGTACAGCTAATTTTGATAAGTGCTGGACCTCAATGTCTCCTGTTGATTCACGGGCACCCACACCTACAGCATCTGATCATTTCCAGGGCTATGCTTACGTGGCACCGAACTCTTGGCTTTCATCGAGTCCAAGCTAG 960 0.4573 MLSTSQKQSLHPILSANLGKLTLPSSSSTTHHDLDFPPFSSHDPNPSPPTAIPGSPQVIQRTDCEVGEKQEVCVSDSGEQLICKIGPGDFQILRVVGQGAFGKVFQVRKNSDRLDGEGGGGNGDGIFAIKGIFSEDQARLYTAEIVSAVSHLHKCGIVHRDLKPENILMDADGHVMLTDFGLAKEIDESGRSNSLCRTTEYMAPEILLARPQQGGRLVERCSQLLQKDPSKRLGNGPNGDSQFKSHKWIHSINWKKLEARELQPKFKPDVNGLDCTANFDKCWTSMSPVDSRAPTPTASDHFQGYAYVAPNSWLSSSPS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0890 319 SMART serkin_6 90 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0890 319 FunFam Non-specific serine/threonine protein kinase 121 203 - -
Lele20g0890 319 ProSiteProfiles AGC-kinase C-terminal domain profile. 250 317 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele20g0890 319 Pfam Protein kinase domain 130 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0890 319 Gene3D Transferase(Phosphotransferase) domain 1 130 210 - -
Lele20g0890 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Lele20g0890 319 Gene3D Phosphorylase Kinase; domain 1 57 125 - -
Lele20g0890 319 Pfam Protein kinase C terminal domain 270 307 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lele20g0890 319 ProSiteProfiles Protein kinase domain profile. 1 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0890 319 SUPERFAMILY Protein kinase-like (PK-like) 87 312 IPR011009 -
Lele20g0890 319 PANTHER RIBOSOMAL PROTEIN S6 KINASE 222 312 - -
Lele20g0890 319 MobiDBLite consensus disorder prediction 24 57 - -
Lele20g0890 319 Gene3D Transferase(Phosphotransferase) domain 1 220 268 - -
Lele20g0890 319 Gene3D Phosphorylase Kinase; domain 1 269 289 - -
Lele20g0890 319 SMART pkinase_C_6 250 309 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0890 Lele-ChrLele20 15333153 15335931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0890 77 319 AGC Kinase Gene Family AT3G08720 40.525 6.73e-72 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Lele20g0890 Pkinase 5.1e-28 CL0016