Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0888 ATGGATCCTCCCCTCATCAACGAGTCTACATTCTCCCACGCTAAACCTTCTGCCTATAGTCTCACCGAGATTTGGCCTTTCCCTGGGGACCACCCCGCCGGACCTGGATTGGGCCTCCGAATGCCCCATTTAGGTCATAATTTGGCCTCTTTTCCCGGAGATGGCTCCGCCGAGGAGTCCACCGTCACGGAGCAGAGCGTCGGCGGCGGAGGAAATCACAGGAAGAGGAAAGATGCAACCTCTGAGGACGAGTCCTCAAACATGGTTTCCATGATTAGTGCCAATGATTTGAATGATTCTGGAAATAAACGGATAAAATTAGGAGTATCCAAGGATGAAAATGGTCTGAAGGCTGAAGCAGAAGCAAGTTCAGTAGCGGGTAGCAAGTCAGCTGAACAAAGTACTAAACCTCCCGAGCCACCTAAGCCAGACTATATACACGTGAGAGCAAGAAGAGGCCAAGCTACTGATAGCCACAGTCTTGCAGAAAGAGCAAGAAGGGAAAAGATCAGCGAGAGGATGAAAATTCTACAAGATTTGGTCCCTGGATGTAACAAGGTAATTGGTAAAGCATTTGTCCTGGATGAGATAATCAATTATATTCAATCGCTGCAGCGGCAGTTCCTTTCGATGAAGGTCGAAGCAGTTAATTCAAGAGTGAACATTAACCCAACTATTGAAGGGTTCCCATCGAAAGATCTTGGTGCTCAGCCACTTGACGTTGCTGGAATGATATTTGGATCACAAGCAGGCAGGACTTATGCTCAGGGAACACAACTGGGATGGCTGCAAATGCAGATAGGGGGTGGTGGTTCCGGGAGAGCAACATAG 831 0.4838 MDPPLINESTFSHAKPSAYSLTEIWPFPGDHPAGPGLGLRMPHLGHNLASFPGDGSAEESTVTEQSVGGGGNHRKRKDATSEDESSNMVSMISANDLNDSGNKRIKLGVSKDENGLKAEAEASSVAGSKSAEQSTKPPEPPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKAFVLDEIINYIQSLQRQFLSMKVEAVNSRVNINPTIEGFPSKDLGAQPLDVAGMIFGSQAGRTYAQGTQLGWLQMQIGGGGSGRAT 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0888 276 MobiDBLite consensus disorder prediction 118 145 - -
Lele20g0888 276 FunFam Basic helix-loop-helix transcription factor 151 221 - -
Lele20g0888 276 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 204 IPR011598 GO:0046983
Lele20g0888 276 CDD bHLH_AtBPE_like 144 225 - -
Lele20g0888 276 MobiDBLite consensus disorder prediction 49 88 - -
Lele20g0888 276 MobiDBLite consensus disorder prediction 54 68 - -
Lele20g0888 276 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 214 IPR036638 GO:0046983
Lele20g0888 276 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 64 245 IPR024097 GO:0006355
Lele20g0888 276 Pfam Helix-loop-helix DNA-binding domain 158 205 IPR011598 GO:0046983
Lele20g0888 276 Gene3D - 151 224 IPR036638 GO:0046983
Lele20g0888 276 SMART finulus 160 210 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0888 Lele-ChrLele20 15324863 15327476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0888 1 269 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 54.225 2.21e-83 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele20g0888 HLH 5.6e-08 No_clan