Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0877 ATGAGAAGTGGCGAGGGATTTATGCCTCTGCTTCTCACGCCCTCGGGATCCAAAAACGGTGGGATAAAGCCATTAAAAATGGAGAATTCCGGCTTTAATTTCGACTTCAACTCCAAACGGGTGTCAACGGTGGCCAGCATATGGATTCAGTGCACCAGTGGCTCCTTCTACACGTTTTCAATCTACTCCAATGCCCTCAAGTCCACTCAGCACTATGATCAGTCTACCCTAGACACCATATCCGTCTTCCAGGACATCGGCGTCAACGCCGGCGTCATCTCCGGTCTTCTGTATGATTTCGCTGCCCACCGAACAAGGGCTGGCCCTTGGCTGGTTCACCTTCTTGGTGCAGCCCAATGCTTTTTGGGCTATTTCCTCATGTGGGCCGCCGTCGCCGGCGTCATCCCTCCACCGCCCGTGCCGCTTATGTGTTTGTTCATGCTCGTAGCTGCTCATGCTCAGAGCTTTTTCAATACTTCCAATGTTGTCACCGGCGTGCGTAATTTCCCACATTATGGTGGAACCATTGTGGGCATTATGAAGGGATTTCTTGGTCTCAGTGGAGCTATACTAATCCAAGTGTATCAGACAATATTTAAGAACAAGCCTACTGCATACCTCCTGATGCTAGCCTTCTTACCACCCGTAAATACCTTGCTGCTTATGTGGTTTGTCAGAATCCACAATACTCGTGAGGCAGATGAGAGGAAATATCTAGATGTTTTGTCTATGATAACTCTAGTTGTAGCTGCTTATCTTATGGCCATCATAATTGTAGAGAGTATTTTTAGTCTGCAATTATTGGTCCGCATCTTTGTGTTCATTTTGCTGATAGCTTTGTTAGCCTTGCCTCTGTTTGTTGCACTAAAAGCACAGAAAGGAAACTTGAAAAATGCTTCAGAGAGTTTTCCTTCCGAGGCTTCCCCTTTAATTGTTGAACCAACCCACTTAGAGAGGGAGAAGAGGAATGTAAGACAAGATTCTGCTGAGGTTCATACGCCTAGTAATACAGATCAAGATATGGGAGAAAACCAGAATCTGGCACAAGCTTTGCAATCTGTGAACTTTTGGCTTCTGTTTGTTTCAATGGCATGTGGTATGGGATCAGGACTTGCAACAGTCAATAACATTGGTCAGATTGGAGGGTCCCTCGGTTATACAAGCCATGAGACAGGTACTTTGGTTTCTTTGTGGAGCATTTGGAATTTTCTCGGCCGTTTTGGAGCCGGTTACGTTTCTGATTATTTCTTACACAAAAGAGGATTGTCACGGCCTTTATTCATGTTCATCGCTCTAATGATGATGAGCATTGGCCATGTGGTGATAGCTTCTGGATTGCCTGCTGCTCTATATGCTGGTTCCGTATTGGTTGGTGTTTTTTATGGTTCTCAATGGTCACTAATGCCTACAATTACTTCAGAAATATTTGGGCTCACACATATGGGAAGCATATTCAACACAATTACTATAGCAAGTCCTGTTGTATCTTATATATTATCTGTTAGAGTAGTTGGGTATATATATGACAAAGAAGCTTCAGAAGGGTATACATGCACTGGAACTCATTGTTTTATGTTATCTTTCCTTATAATGGCTTCTACTGCTATTTTGGGTTCCCTGGCTGCTTTAGGCTTGTTTTTTCGAACAAAAAGTTTCTATGATCAAGTTATTCTCAGACGACTTCAATATCCTTCTCAGTGA 1701 0.4368 MRSGEGFMPLLLTPSGSKNGGIKPLKMENSGFNFDFNSKRVSTVASIWIQCTSGSFYTFSIYSNALKSTQHYDQSTLDTISVFQDIGVNAGVISGLLYDFAAHRTRAGPWLVHLLGAAQCFLGYFLMWAAVAGVIPPPPVPLMCLFMLVAAHAQSFFNTSNVVTGVRNFPHYGGTIVGIMKGFLGLSGAILIQVYQTIFKNKPTAYLLMLAFLPPVNTLLLMWFVRIHNTREADERKYLDVLSMITLVVAAYLMAIIIVESIFSLQLLVRIFVFILLIALLALPLFVALKAQKGNLKNASESFPSEASPLIVEPTHLEREKRNVRQDSAEVHTPSNTDQDMGENQNLAQALQSVNFWLLFVSMACGMGSGLATVNNIGQIGGSLGYTSHETGTLVSLWSIWNFLGRFGAGYVSDYFLHKRGLSRPLFMFIALMMMSIGHVVIASGLPAALYAGSVLVGVFYGSQWSLMPTITSEIFGLTHMGSIFNTITIASPVVSYILSVRVVGYIYDKEASEGYTCTGTHCFMLSFLIMASTAILGSLAALGLFFRTKSFYDQVILRRLQYPSQ 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0877 566 SUPERFAMILY MFS general substrate transporter 37 231 IPR036259 -
Lele20g0877 566 Pfam Nodulin-like 42 288 IPR010658 -
Lele20g0877 566 MobiDBLite consensus disorder prediction 320 342 - -
Lele20g0877 566 CDD MFS_Mch1p_like 38 538 - -
Lele20g0877 566 ProSiteProfiles Major facilitator superfamily (MFS) profile. 354 566 IPR020846 GO:0022857
Lele20g0877 566 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 42 554 - -
Lele20g0877 566 Gene3D MFS general substrate transporter like domains 238 541 IPR036259 -
Lele20g0877 566 SUPERFAMILY MFS general substrate transporter 245 551 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0877 Lele-ChrLele20 15271152 15274930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0877 36 563 Nodulin-like Gene Family AT1G74780 56.586 0.0 592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0986 17 20715806 20718325 Lele20g0877 20 15271152 15274930 hybridization
Lele18g0549 18 3234985 3238626 Lele20g0877 20 15271152 15274930 hybridization