Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0876 ATGGACCTTCTTGCGCCGGATAAGGATGAGAATATTGAACATGACGCGTCGGATTTTGTCTCCCAAACTCGACTCGTCGATGCTCCTCTACTCTTATTTATTTGCTTCCACGAGGCTCTGCGCGGAGAACTCAACGAGCTTCGGAGCTTGGCGGAAACGTCGTCGCTGGAGAATGCATCACACAACCCCGAGCTTATTCTCAAACTGCAACGAAGATTTGAGTTTCTCAAATTAGTGCTGAAGTATCATTGCGCCGTAGAAGACGAGGCTGCACATCACCCCTGGCGTGCAGCAGATCCAATTGCGACAAGGGATCTTACACAATCATGGGCTTCAAAGAACGAAGAAGCTACAGATTTTGCCCAATACACTTGGGATCTGCATACCTGCTCTGTTATCTTCCCTGCATTGGATATACATGTAAAAAATGTAGTATGTACTTATTCCCTTGAACATAATAGCCCCGGTGAAGCCTTCAACTCAATCTTTCACTATTTAGATGAGTTGATGGATCCAAATGGGAATATTTCCAAGCTGTTTCAAGAACTTAGATGCTGCATTGGAATCTTGCAAGCCACCGCATTCCAGCATATGCAGAAGGAAGAAGAGCAGGTTTTTCCTCTCTTGATGCAGAAAGTTTCTATGGAGGAACAGGCTTTGTGGTCTGACAAACAAGCAGAAGTCCGGAAGTTTTTAAATGAAATTACACCAATGGAGAAAGAACTGCAAGAGGTTTTGATTGCTTGGCCTGGTAGGAACACCCAAATCTTCCCCGAGGACTATTCTCTGAATGAAGTTGATCAATGTGCCGACGGATTCCTACATATGAAAGGACCACGCAGGTTGAGTTATTGCAATAGGAATTTTAAAGCCATTTCAAATCATATGAAAGCAAATTGTTCAGAAGTAGAAGATAGCGCCAATGAAGTTAATGTTCTTTATCTTTGGCATAATGCCATCAAGAAAGATATGAAAGAAATGTTAGAAGAACTTCATCAAATCAGAAACAACACTTGTTTTCATAACTTGGATTCTTTACTCGTCCAACTAAAATTCTTCGCTGAAGTTCTCGTCTTCTACAGCAATGCTCAGAAGAAATTCTTTTACCCAGTTTTGAGTGAACTTGCTTATGGCTTGTTGACCAAGTCTAGTGAACAATTTCTTGGTGAAAGTCATATTGAAGATTTACAGCTGTTGCTATTGTATAATGCTGAAAGCGGTATGCCGTTGTCTGAATTCGTGGAGAAGCTTTGCAGAGAGCTTGAACTATTTATGACACGAATCAACAAACAATTTGCATTTCAAGAAACTAACAATTTGCATTTCAAGAAACTAAGGTCTATTCTCAGTGCCATAAAACAAGGAAATCCTTTCGTCCATGAAGCTTTAGCAGCACTAGTACATGAGTGGTTCCGTGTCGGTTATTCAGGTAAAACTTCAATTGAAAAATTCCGACAAGACCTGAGACATATTTTTAAAAGCAAAAACTCTATGTTAACTGAGCAAGTCAAGGAAGCTCCCGGGGTTTCTTTCTTGAATTATGACAAGCCTCATAAAGGATCTATTGGTAACAATGGTTTGTCTTATTCATCATCTTCTGGATTCAACAATGTGACCAAGTATGAGACTCCATACTCTACGGGAATTAATATGCATATATTCTTCCCTGCCATAACGACGAAGTTAAATCACCGTCCTATATTTCAGGCAGCTGATAGTTCTTCTGCTCCCTTTCTTGATGATTCAAAACATATTAACCTTATATTTTTCTTTCACAAGGCTATTAAGAAGGATTTGGATTACCTTGTTCTCGGATCAGCTCAGATAGAGAGAAATGTTGCGATGCTTGTGAATTTCAGCAAAATATTCCATCTAATATGCTTTCTTCATCGAATCCATACTGAGACAGAGGATGAGATAGCATTCCCAGCCTTAGAGGCAATGAGTAAAGCGAAAAACATTAGCCTCTCTTGTACGATTGATCACAAAATTGAAGTTGAACACTTCAACAAAATATCCTGCATCCTTGATAAGATGTTCGATCTGCATTTTTCAGTTTCTAGTTTTGAAACAGATACATGGGAGCAGAGAATGCTAATGCATCATCAACTGTGCAGAACGCTACAGGAAATGTGCAAATCAATGCATAAACTACTTTCTGACCATATGAATCGTGAAGAAATTGAAATTGGGCATTTAATTAGAGAATTCTTCTCCAATAAGGATCAAATAAAGATCGTGGGGTGCATGCTTGGAAGAATTAGAGCAGAAATATTACAAGATACGATACCCTGGTTAATGACATCTTCAACCCCAGAGTAA 2322 0.3949 MDLLAPDKDENIEHDASDFVSQTRLVDAPLLLFICFHEALRGELNELRSLAETSSLENASHNPELILKLQRRFEFLKLVLKYHCAVEDEAAHHPWRAADPIATRDLTQSWASKNEEATDFAQYTWDLHTCSVIFPALDIHVKNVVCTYSLEHNSPGEAFNSIFHYLDELMDPNGNISKLFQELRCCIGILQATAFQHMQKEEEQVFPLLMQKVSMEEQALWSDKQAEVRKFLNEITPMEKELQEVLIAWPGRNTQIFPEDYSLNEVDQCADGFLHMKGPRRLSYCNRNFKAISNHMKANCSEVEDSANEVNVLYLWHNAIKKDMKEMLEELHQIRNNTCFHNLDSLLVQLKFFAEVLVFYSNAQKKFFYPVLSELAYGLLTKSSEQFLGESHIEDLQLLLLYNAESGMPLSEFVEKLCRELELFMTRINKQFAFQETNNLHFKKLRSILSAIKQGNPFVHEALAALVHEWFRVGYSGKTSIEKFRQDLRHIFKSKNSMLTEQVKEAPGVSFLNYDKPHKGSIGNNGLSYSSSSGFNNVTKYETPYSTGINMHIFFPAITTKLNHRPIFQAADSSSAPFLDDSKHINLIFFFHKAIKKDLDYLVLGSAQIERNVAMLVNFSKIFHLICFLHRIHTETEDEIAFPALEAMSKAKNISLSCTIDHKIEVEHFNKISCILDKMFDLHFSVSSFETDTWEQRMLMHHQLCRTLQEMCKSMHKLLSDHMNREEIEIGHLIREFFSNKDQIKIVGCMLGRIRAEILQDTIPWLMTSSTPE 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0876 773 Coils Coil 317 337 - -
Lele20g0876 773 CDD Hr-like 587 730 - -
Lele20g0876 773 Gene3D nmb1532 protein domain like 128 225 - -
Lele20g0876 773 Gene3D nmb1532 protein domain like 582 752 - -
Lele20g0876 773 CDD Hr-like 36 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0876 Lele-ChrLele20 15264062 15271085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0876 28 769 C2H2 Transcription Factor Family AT3G18290 26.316 2.19e-61 223