Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0875 ATGAACTCCAAGAAGAATCCTCTTCCAACAAAAACGAATTTTCTTCAGAGTGATTATATTGGTGATAATAATGAGCAGTCTCACCATTGCAGTCGTCATAGCAAATCCCAGGTTCGTAAAGCAAAGAAGAATAGTTGTGAATGTTCAGAATGCAGGCATCAATTGAGTGATAATAACAAACAAACTTGCACTAAAGTAACAGATATAACAAGTTCGATCATTGACAAAGGACAGTCTCTTCAATTCTGCGAAAACTCTGGGCAATATGACCATCTTATGAAGATAAGTCCAGATGATCTGGAGATGGCCATAAGAAGGGTATCTCGTGACTCTTCCTTAGATCCGCAGAAGAAGTCATACATAATCCAGAATCTGCTGATGAGGTTGATCAAAGGCACTATCACAAACAATGGGCAGAAATTTCCTGGGCAATATCCGTCTTACAGGGACCCTCTCAAAGAAATCTATGGCTGCAAACACTACAAGAGAAGCTGTAAGCTTTTAGCTTCCTGCTGCAACCAACTTTATACATGCATACATTGCCATAATAATGCATCAGATCATTTACTTGACAGGATCTGTAGATTGTTCGATGATGAAAGAGAGAAATCTTTAGAGGATAACTGCCCAATTTGTCATGAATACATCTTTACGTCCTACTCTCCTGTAAAGGTCCTTCAATGTGGTCATGTCATGCACTCAACATGTTTTCAGTCCTTGTACCAATTTTTTCTTCTTCCTATCTCAAGCGATGAGCGACCTAACGCCATTAGAATGCCTTCGCAGATATATTTTAGGATGTTAGATGTGTTATTGGCTGAAGAGAAAATGCCAGACGAGCATTTGGGTCAAACTCAGCTCCATTTCACTGGCTTTACCACAAATGCTCTTCTTGCGGGTCCTACAACACCAGAGTTACATGATTCTTCCATTAGCAGCAATAAGTGCTTCTATTCAGATCCTTCATACTAA 972 0.3961 MNSKKNPLPTKTNFLQSDYIGDNNEQSHHCSRHSKSQVRKAKKNSCECSECRHQLSDNNKQTCTKVTDITSSIIDKGQSLQFCENSGQYDHLMKISPDDLEMAIRRVSRDSSLDPQKKSYIIQNLLMRLIKGTITNNGQKFPGQYPSYRDPLKEIYGCKHYKRSCKLLASCCNQLYTCIHCHNNASDHLLDRICRLFDDEREKSLEDNCPICHEYIFTSYSPVKVLQCGHVMHSTCFQSLYQFFLLPISSDERPNAIRMPSQIYFRMLDVLLAEEKMPDEHLGQTQLHFTGFTTNALLAGPTTPELHDSSISSNKCFYSDPSY 323
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0875 323 SUPERFAMILY RING/U-box 208 242 - -
Lele20g0875 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 202 251 IPR013083 -
Lele20g0875 323 ProSiteProfiles Zinc finger CHY-type profile. 151 214 IPR008913 GO:0008270
Lele20g0875 323 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 200 286 - -
Lele20g0875 323 SUPERFAMILY CHY zinc finger-like 149 214 IPR037274 GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele20g0875 Lele-ChrLele20 15261526 15263892 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0875 89 286 C2H2 Transcription Factor Family AT3G18290 33.916 1.01e-42 155