Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0874 ATGACCCTTAAAGGTGGCACAAAGCAGGCCTGCGCAGCTTGCAAATTTCAGAGAAGAAAGTGTACCCCAGAATGTGTTCTCGCTCCTTACTTCCCCGCCGACCAACCCAAGGCTTTTCAGAATGTCCACAAGCTGTTTGGAGTCAGCAACATCGAGAAGATCTTGAAGAACTTGGATCCTAGCCAGAAGAAAATAGCCATGGACTCCATCATTTGCCAAGCTAATTACAGAGATAAATACCCTGTTCACGGTTGTTGGGAGGAGATTTGCAGGCTTCGTTACCAAATATGGTACGTTGAAGAAGAGCTCCGTGCTGTTCATCAGCAACTAGAGATTTACAGACAACATTTTTTGCAGCACCAAGGTTCTTCTTCATGTTCAATGGTTGATGATGTCACTTCTCAGCTAGAGTTGGGGATGAATCCTCGTAATAATCATGCACTACCGCTCTTCAACCATAGTTCTCCATCATTAAACCCAGAGACATATAATTCAGAGGTTGCTCTGCCTGCAGTTTCCGATCAACATTCTTACTGCAACAGCACTAGTATTGTGGGGTACAACTCCATGGACGTGGAATCTAAGGATCATGTTACACCAAATAGCTTTTGGGCCCAGCATCCCTGCCAAGACGATGATGGAGATTCCATGGCCATGGCCATGCATTCTCAGTTGCAGTTAGTTGCCTCGCAGCCACTGGACATGGAACAAAAAGTTGTCGGAGAATATTATGATGAGATGATGAGTCCACTTTTTTGA 759 0.4506 MTLKGGTKQACAACKFQRRKCTPECVLAPYFPADQPKAFQNVHKLFGVSNIEKILKNLDPSQKKIAMDSIICQANYRDKYPVHGCWEEICRLRYQIWYVEEELRAVHQQLEIYRQHFLQHQGSSSCSMVDDVTSQLELGMNPRNNHALPLFNHSSPSLNPETYNSEVALPAVSDQHSYCNSTSIVGYNSMDVESKDHVTPNSFWAQHPCQDDDGDSMAMAMHSQLQLVASQPLDMEQKVVGEYYDEMMSPLF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0874 252 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Lele20g0874 252 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 161 - -
Lele20g0874 252 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0874 Lele-ChrLele20 15259779 15260537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0874 1 140 AS2 family AT3G47870 53.205 6.55e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele20g0874 LOB 1.8e-34 No_clan