Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0869 ATGCTGTTTAGTAAGAAGTTGGAAAACAAGAGTGAGTTAGCGGTTCTGGGAGAAGAAGAGGAGGAGGAGGAGATGGAGGACAAGTCCCAAGTATTGGAGGCTGTGTTGAAGGAAGCTGTGGATTTGGAAAACATACCCATTGAGGAGGTTTTTGAGAATCTAAGATGTAGCAGAGAAGGTCTCACCTCTGTGGCTGCTGAAGAGAGGCTCACCATTTTCGGGCATAACAAGCTTGAAGAGAAAAAGGAGAGCAAATTTTTGAAGTTCTTGGGTTTTATGTGGAATCCTCTGTCTTGGGTTATGGAGGCTGCTGCTATAATGGCAATTGCGCTTGCAAATGGAGGAGGGAAGCCTCCTGACTGGCAAGACTTTGTGGGGATCATCACTCTGCTTCTCATCAATTCAACTATTAGCTTCATCGAGGAAAACAATGCTGGTAATGCTGCAGCCGCTCTCATGGCTCGTCTTGCTCCAAAAGCAAAGGTTCTTCGAGATGGTAGTTGGAGTGAGCAAGATGCTGCAGTCCTGGTTCCAGGTGATATAATCAGTGTTAAACTGGGAGATATCATACCAGCTGATGCTCGTCTTCTTGAAGGGGATCCTCTGAAAATCGATCAGTCTGCACTTACAGGTGAGTCCCTGCCAGTGACAAAAGGTCCTGGTGATGGTGTGTACTCTGGTTCTACCTGCAAACAAGGAGAGATTGAGGCTGTGGTCATTGCCACTGGTGTGCATACCTTCTTTGGGAAAGCTGCTCACCTTGTAGATACCACTAATCAAGTTGGTCACTTCCAAAAGGTCTTGACTGCTATTGGGAACTTCTGCATATGTTCAATTGCTCTGGGGATGCTTATTGAAATCATTGTTATGTATCCTATCCAAGACCGACAATACCGTCCTGGAATTGATAACCTTCTTGTACTTCTAATTGGAGGAATTCCAATTGCCATGCCTACAGTTCTTTCAGTGACCATGGCTATTGGTTCTCACAGGTTATCTCAGCAGGGAGCTATCACTAAGAGGATGACAGCCATTGAAGAGATGGCAGGCATGGATGTGCTTTGCAGTGATAAAACTGGGACTCTAACATTAAACAAGCTAACTGTTGACAAAAATCTTATTGAGGTTTTTGTAAAAGGAGTGGATCCGGATACTGTTGTTTTGATGGCAGCTCGAGCCTCGAGACTTGAGAATCAAGATGCAATAGATTCTGCCATAGTTGGGATGCTGGCTGATCCAAAAGAGGCACGAGTGGGAATCCAAGAAGTACATTTTCTTCCTTTCAATCCCACTGATAAGAGAACAGCATTGACTTACATTGATGGTGAAGGTAAAATGCATAGGGTAAGCAAAGGTGCACCAGAGCAGATTCTCAATCTTGCACACAATAAGTCAGATATCGAACGCAGGGTCCATGCAATAATAGACAGGTTTGCAGAGCGTGGTCTACGATCTCTTGCTGTAGCATACCAGGAAGTTCCAGAAGGAAGGAAGGAGAGTACTGGAGGCCCATGGCAGTTCATTGGTCTTATGCCTCTATTTGATCCACCAAGGCATGACAGTGCAGAAACAATACGGAGGGCTCTAAACCTTGGAGTAAATGTCAAAATGATAACAGGTGATCAACTAGCTATAGGGAAGGAAACCGGCCGTCGTTTGGGAATGGGGACCAACATGTATCCCTCATCTGCGTTGCTTGGGCAGGACAAGGATGAGTCCATTTCTGCACTACCCATTGATGAATTGATAGAAAAAGCTGATGGATTTGCTGGTGTTTTTCCTGAACACAAGTATGAGATTGTAAAACGCTTGCAAGCGAGGAAACATATATGTGGAATGACTGGTGATGGAGTAAATGACGCACCTGCTCTTAAAAAGGCTGACATTGGTATAGCTGTTGCCGATGCAACTGATGCTGCTCGTAGTGCATCTGATATTGTTTTAACAGAACCTGGTCTTAGTGTTATCATTAGTGCTGTTTTGACAAGCCGGGCCATCTTCCAGAGAATGAAAAATTATACAATTTATGCAGTCTCAATTACAATCCGTATTGTGCTCGGTTTCATGTTGCTGGCCCTCATATGGCAGTTTGACTTTCCTCCTTTTATGGTGCTAATCATTGCCATCCTAAATGATGGTACTATCATGACAATCTCAAAAGATCGAGTAAAACCCTCTCCTCTGCCTGATAGCTGGAAGCTCGCCGAGATATTTACCACCGGCATTGTACTAGGAAGTTACTTGGCAATGATGACAGTGATATTCTTTTGGGCAGCATACAAAACAGATTTCTTCCCACGAGTATTTGGGGTCTCAACTCTTGAAAAAGCTGCTCATGATGATTTCCGGAAACTTGCCTCGGCGATATATCTTCAAGTGAGCACTATCAGTCAGGCCCTTATATTCGTGACTCGGTCTCGCGGCTGGTCATATGTTGAGCGTCCTGGTATACTGTTAATGACTGCTTTTGTGGTTGCTCAGCTGATTGCCACTTTGATTGCAGTATATGCAAACTGGGGCTTTGCTGCAATTGAAGGAATTGGTTGGGGTTGGGCAGGAGTAATATGGCTATACAACATCATATTTTACATCCCACTTGATTTCATCAAGTTCTTCATTCGTTATGCTTTGAGTGGCAGGGCTTGGGATCTTGTCATTGAGCAAAGGATTGCATTTACAAGACAAAAGGACTTTGGGAAGGAACAAAGGGAACTCCAATGGGCACATGCTCAGAGAACCTTACATGGATTACAAGTACCTGACACCAAGTTCTCCGACCGCGCTCATTTCAATGAACTCAATCAAATGGCTGAAGAAGCTAAAAGGAGAGCTGAAATCGCAAGGTTGAGAGAATTGCATACACTAAAAGGTCATGTAGAATCAGTTGTGAGATTGAAGGGGCTTGACATTGACACAATTCAGCAAGCTTACACAGTCTAA 2940 0.4415 MLFSKKLENKSELAVLGEEEEEEEMEDKSQVLEAVLKEAVDLENIPIEEVFENLRCSREGLTSVAAEERLTIFGHNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGSWSEQDAAVLVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIALGMLIEIIVMYPIQDRQYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFVKGVDPDTVVLMAARASRLENQDAIDSAIVGMLADPKEARVGIQEVHFLPFNPTDKRTALTYIDGEGKMHRVSKGAPEQILNLAHNKSDIERRVHAIIDRFAERGLRSLAVAYQEVPEGRKESTGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIVLGSYLAMMTVIFFWAAYKTDFFPRVFGVSTLEKAAHDDFRKLASAIYLQVSTISQALIFVTRSRGWSYVERPGILLMTAFVVAQLIATLIAVYANWGFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQVPDTKFSDRAHFNELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0869 979 CDD P-type_ATPase_H 60 871 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele20g0869 979 Gene3D - 928 979 - -
Lele20g0869 979 PRINTS H+-transporting ATPase (proton pump) signature 645 670 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0869 979 PRINTS H+-transporting ATPase (proton pump) signature 471 489 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0869 979 PRINTS H+-transporting ATPase (proton pump) signature 586 602 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0869 979 PRINTS H+-transporting ATPase (proton pump) signature 614 630 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0869 979 PRINTS H+-transporting ATPase (proton pump) signature 790 811 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0869 979 Gene3D - 120 845 - -
Lele20g0869 979 SUPERFAMILY HAD-like 351 661 IPR036412 -
Lele20g0869 979 FunFam Plasma membrane ATPase 158 242 - -
Lele20g0869 979 Coils Coil 18 38 - -
Lele20g0869 979 PRINTS P-type cation-transporting ATPase superfamily signature 355 369 - -
Lele20g0869 979 PRINTS P-type cation-transporting ATPase superfamily signature 637 649 - -
Lele20g0869 979 PRINTS P-type cation-transporting ATPase superfamily signature 509 520 - -
Lele20g0869 979 PRINTS P-type cation-transporting ATPase superfamily signature 531 541 - -
Lele20g0869 979 PRINTS P-type cation-transporting ATPase superfamily signature 205 219 - -
Lele20g0869 979 PRINTS P-type cation-transporting ATPase superfamily signature 614 633 - -
Lele20g0869 979 Gene3D - 158 242 - -
Lele20g0869 979 Pfam Cation transporter/ATPase, N-terminus 44 107 IPR004014 -
Lele20g0869 979 Gene3D - 367 514 IPR023299 GO:0000166
Lele20g0869 979 Pfam haloacid dehalogenase-like hydrolase 351 628 - -
Lele20g0869 979 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 60 836 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele20g0869 979 PANTHER CALCIUM-TRANSPORTING ATPASE 43 913 - -
Lele20g0869 979 Pfam E1-E2 ATPase 156 334 - -
Lele20g0869 979 SFLD Haloacid Dehalogenase 337 665 - -
Lele20g0869 979 SUPERFAMILY Calcium ATPase, transduction domain A 158 255 IPR008250 -
Lele20g0869 979 Coils Coil 930 950 - -
Lele20g0869 979 ProSitePatterns E1-E2 ATPases phosphorylation site. 357 363 IPR018303 -
Lele20g0869 979 SMART Cation_ATPase_N_a_2 41 113 IPR004014 -
Lele20g0869 979 FunFam Plasma membrane ATPase 508 662 - -
Lele20g0869 979 Gene3D - 352 651 IPR023214 -
Lele20g0869 979 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 127 389 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0869 979 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 589 703 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0869 979 SUPERFAMILY Calcium ATPase, transmembrane domain M 41 877 IPR023298 -
Lele20g0869 979 FunFam Plasma membrane ATPase 367 514 - -
Lele20g0869 979 SFLD p-type atpase 337 665 IPR044492 -
Lele20g0869 979 FunFam ATPase 4 plasma membrane-type 599 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0869 Lele-ChrLele20 15223144 15228647 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0869 25 979 Primary Pumps ATPases AT3G47950 92.573 0.0 1791