Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0865 ATGGTTACCGTTGCCTGGGTTTTCCTGGTGATTTCCGCCATCGTTTTCTTTCCTTCCTCTTTTGCTCTCACTCAAGATGGGCTGGCGTTGTTGGAAATCAAAAGCGCTTTGAATGATACTAAAAATGTTCTCAGCAACTGGCAAGCTTTTGATGAGTATCCATGTGCATGGACCGGTATCAGTTGTTATCCCGGCGAACAACGAGTTCACTCCATAAATCTGCCCTACATGCAATTCGGAGGTATTATCTCTCCCAGCATTGGCAAACTCAGTGGACTGCAGAGATTGGCACTGCATCAGAACAGCTTACATGGAACTATTCCTCCTGAAATTACCAATTGTACAGAGCTGAGAGCATTGTACCTGAGGGATAATTATTTACAAGGTGGCGTACCATCAAATATTGGAAACCTTTCCTATTTAACCATACTGGATTTATCCAGCAATTCCTTGAAGGGTGCTATACCTTCATCTATTGGCCGCCTCACTCATTTGCGACTTTTGAACTTGTCAACTAATTTCTTTTCTGGTGAAATCCCTGACATTGGAGTACTAAGCACCTTCGGAAATAACTCGTTTACAGGAAACTTAGATCTTTGTGGGCGGCAAGTTGATAAACCTTGTCGAACCTCGCTTGGCTTCCCTGTGGTGTTACCGCATGCTGCAAGTGATGAAGCTACAGTTCCTCCTCCCAAAAGATCTTCACATTACATGAAGATTCTGCTGATAGGTACCATGTCTGCGTTGGCCCTTGCACTTGTGATAATGGTTTCATTCCTCTGGACTTGTATGCTGTCAAAGCAAGAAAGAGCTGCTCGGAGATACAAAAACATCAAGAAGCATTTCGATCCGGAATCAAGCACAAAACTTATGACCTTCCATGGTGATCTGCCATACCCATCATCCACCCTCGTTGAGAAGCTTGATTCTCTTGATGAAAAGGATGAAGTAGGATCAGGAGGGTTGGGTACTGTTTACAGAATGGTCATGAATGATTCTGCAACATTTGCTGTTAAGAGGATGGACAGAAATCATGTTGGATCCGAGCAGGTTTTTGAGAGGAACTTGGAGATTTTGGGCAGCGTCTCACACATAAATCTAGTGAATCTGCGTGGCTACTGCAGGCTTCCTTCTTCAAAGTTCCTTATCTATGATTATTTTGCCGCTGGCAGCTTAGATTATCAATTGCATGAAAATGGTGAAGAACAATTCTTGAATTGGAGTGCTCGTTTGAAAATAGCCCTTGGTTCTGCAAGGGGTTTGGCATATTTGCACCATGAATGCACTCCAAAAATTGTGCACAGCAACATAAAATCCAGCAATATCCTGCTTGATGAAAACTCGGAGCCTCATGTCTCTGATTTTGGACTCTCAAAGCTCTTAGCTGACAAGGATACCAATGTTACCACTGTAGTTGCAGGCACTTTTGGATACATGGCGCCAGAGTATCTTGAAAGTGGTAGGGCTACAATGAAGTCAGATGTGTATAGTTTTGGAGTATTATTGCTAGAACTTGTGACTGGAAAGAGACCAACAGATACTTACTTTGCAAAGCAGGGACTAAACGTTGTTGGATGGATGAACATGTTGCTGAGAGAGAAGAGGATGGAGCAAATGATTGACAGAAGATGCTGTAGAGATGCAGATGCAGCGAGTGTTGAAGCAATGGTTGATGTTGCAGCAAGATGCACAGATGGTAATCCAGACGAGCGTCCATCAATGAAGCAGGTGTTTCAGTTGCTAGAACAAGAACTTGCTATGTCTCCATCTTCAAGTGACTTCTATGAATCCCAATCTGATCATAGTTAA 1809 0.4312 MVTVAWVFLVISAIVFFPSSFALTQDGLALLEIKSALNDTKNVLSNWQAFDEYPCAWTGISCYPGEQRVHSINLPYMQFGGIISPSIGKLSGLQRLALHQNSLHGTIPPEITNCTELRALYLRDNYLQGGVPSNIGNLSYLTILDLSSNSLKGAIPSSIGRLTHLRLLNLSTNFFSGEIPDIGVLSTFGNNSFTGNLDLCGRQVDKPCRTSLGFPVVLPHAASDEATVPPPKRSSHYMKILLIGTMSALALALVIMVSFLWTCMLSKQERAARRYKNIKKHFDPESSTKLMTFHGDLPYPSSTLVEKLDSLDEKDEVGSGGLGTVYRMVMNDSATFAVKRMDRNHVGSEQVFERNLEILGSVSHINLVNLRGYCRLPSSKFLIYDYFAAGSLDYQLHENGEEQFLNWSARLKIALGSARGLAYLHHECTPKIVHSNIKSSNILLDENSEPHVSDFGLSKLLADKDTNVTTVVAGTFGYMAPEYLESGRATMKSDVYSFGVLLLELVTGKRPTDTYFAKQGLNVVGWMNMLLREKRMEQMIDRRCCRDADAASVEAMVDVAARCTDGNPDERPSMKQVFQLLEQELAMSPSSSDFYESQSDHS 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0865 602 Pfam Protein kinase domain 313 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0865 602 Gene3D Phosphorylase Kinase; domain 1 272 386 - -
Lele20g0865 602 SUPERFAMILY Protein kinase-like (PK-like) 291 582 IPR011009 -
Lele20g0865 602 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 185 - -
Lele20g0865 602 ProSiteProfiles Protein kinase domain profile. 311 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0865 602 Pfam Leucine rich repeat 116 173 IPR001611 GO:0005515
Lele20g0865 602 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 387 593 - -
Lele20g0865 602 Gene3D Ribonuclease Inhibitor 23 210 IPR032675 -
Lele20g0865 602 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 68 582 - -
Lele20g0865 602 SUPERFAMILY L domain-like 23 199 - -
Lele20g0865 602 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Lele20g0865 602 Gene3D Transferase(Phosphotransferase) domain 1 387 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0865 Lele-ChrLele20 15210250 15213298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0865 5 589 Receptor kinase-like Gene Family AT2G35620 44.274 1.10e-176 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lele20g0865 Pkinase 9.3e-44 CL0016