Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0850 ATGTATAATGAGCCTCGAGGGTGTAAGAGTAATTTAGATTTGCTTCGGAATAAAGAAGCTGGAACACTTGGTTCCGAAGCAACTCTTGCACCGAGACTTCCGACACCTCTCTCTGTTTCATGGAATGGTAGATTTGAGGTGAAGAGGTTCAGCATTCACCTGTTCATTGGAAGTCCTGAACTATGTTGTCCTGATCTCACAATGGGCAAGTCACCAGGAAAATGGATCAAAACTGTACTGTTTGGGAAAAAGTCATCCAAGTCAAATATTTCCAAAGGAAGAGAGAAACTTGTCATCCAGAAAGAAGCATTGGTTGCTTCCAAGGCATCAGAAACTGGTGTAGCTGTAGAACCACCCCCCTATACTGTTTCCAGAAATGAGGAATTGGAATTGGAGAATAAAGAAGTAGAAAATCTTTCTCCTGTGAATCAGGAAGTGGATTTGGTGCCACATGTTGATCAAGACGCAACTCCTGATCTGGAGAAAATCAGGCAGGAGGAAGCTGCAACAAAGGCACAGGCTGCTTTTAGGGGTTATTTGGCTCGCAGGGCATTCAAGGCCTTAAAAGGGATAATAAGATTGCAAGCTCTTATTCGTGGGCACTTAGTTCGAAGACAAGCTGTTGCTACATTATGTTCCATGTATGGGATAGTCAAATTTCAGTCACTTGTTCGTGGAGGGAGGATTAGACAGTCTCATGCTGGTCATGAAATCCGTGAGAAGTATAATATTTTGAAGCTTCAGGATGGAAAGCGTGCTAATCCAGCTGATATAGCCACAAAATTTGCAAAGTTATCAACAAATACTTACACCCGCAAGCTTCTTGCATCATCTACTACGATAATGGCCTTGCGCCTGCACTATATTCCTGGTGATCCAAATTCAGTGTTAAGTTGGTTGGAGCGCTGGTCCACATCTCACTTTTGGGTACCGATTCCCCAACCCAAGAAAATTCCAGACTCTAGGTCTCGGAGAAAGCAAGCTGGAGAAGTTCAAATGAGCAAGTCAAGACGCACTAACCGGAAGCTTCCAACTGTAAATTCGGACTCAGTCCCAGTGCAAGCAAATCCTGAATCTGAGAAACCAAAAAGAAACCTGAGGAAAATATCAAACCAAGCTGCAGATTCAGGGCAAGAAAATCCACAAAGTGAGCTCGAAAAGGTTAAGCGGAGCCTGAGAAAGATCCATAACCCTGTTGTTGAGAATGCTGTTCCACCAGAAGTTGAATCTGAGACCACCCCAAAACAGCAATTGGAAAAGGCAAATATTACCTTAGAACATATTGTTTCAGAACAAGAGGCTGTTAGCTCTAATGAAATATCTAACAAAGAACCAGCATTGGCTGAGCCTGTGCCCAATGTACTTGATGTGGAAATTACTCCTAGACCTTCGGTTAGCAAGGAGGTGTCTGAAATGTCAGGTGTCTATCAAGTGGAATTGGATCCAAAGCCCTTGGTAGAGAATACATGTAAAGATGAAAATACTTCCGGTGATGATGCTTTAAATGAGCCAAAAGATCTACCAGAGAGTGGTTGTAATGATGAAAATTCTCCCCTAACAAATGGGGATCTGAATCATAAGGAAGATCCAACAGGCAACGAAAACCAGAGACCCTCCCGGCAAGCCTCAGTTCCAGGGAAACAGGAACGTGCAGAGAATGGTATACAGAGTAGTCCCACATTACCAAGCTATATGGCAGCAACTGAATCAGCCAAGGCCAAGTTGAGGGCACAAGGGTCACCAAGGCTTGAACAAGATGGTGTTGAGAGAAACAACTATGCACGTCGACATTCTCTGCCATCCTCAACTAACAGCAAAATTTGTTCGCATTCACCAAGGACACAGAGACCAGTTCAACAAGGCAGCAAAGGGGGGCACAAAACTGTCTCATCTAGAGATGGAAATGGAAGGGTAATTCAAGCCGAGTGGAGGAGGTGA 1938 0.4391 MYNEPRGCKSNLDLLRNKEAGTLGSEATLAPRLPTPLSVSWNGRFEVKRFSIHLFIGSPELCCPDLTMGKSPGKWIKTVLFGKKSSKSNISKGREKLVIQKEALVASKASETGVAVEPPPYTVSRNEELELENKEVENLSPVNQEVDLVPHVDQDATPDLEKIRQEEAATKAQAAFRGYLARRAFKALKGIIRLQALIRGHLVRRQAVATLCSMYGIVKFQSLVRGGRIRQSHAGHEIREKYNILKLQDGKRANPADIATKFAKLSTNTYTRKLLASSTTIMALRLHYIPGDPNSVLSWLERWSTSHFWVPIPQPKKIPDSRSRRKQAGEVQMSKSRRTNRKLPTVNSDSVPVQANPESEKPKRNLRKISNQAADSGQENPQSELEKVKRSLRKIHNPVVENAVPPEVESETTPKQQLEKANITLEHIVSEQEAVSSNEISNKEPALAEPVPNVLDVEITPRPSVSKEVSEMSGVYQVELDPKPLVENTCKDENTSGDDALNEPKDLPESGCNDENSPLTNGDLNHKEDPTGNENQRPSRQASVPGKQERAENGIQSSPTLPSYMAATESAKAKLRAQGSPRLEQDGVERNNYARRHSLPSSTNSKICSHSPRTQRPVQQGSKGGHKTVSSRDGNGRVIQAEWRR 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0850 645 MobiDBLite consensus disorder prediction 485 510 - -
Lele20g0850 645 MobiDBLite consensus disorder prediction 318 337 - -
Lele20g0850 645 MobiDBLite consensus disorder prediction 462 645 - -
Lele20g0850 645 Gene3D - 162 212 - -
Lele20g0850 645 ProSiteProfiles IQ motif profile. 189 216 IPR000048 GO:0005515
Lele20g0850 645 PANTHER IQ-DOMAIN 5-RELATED 68 608 - -
Lele20g0850 645 SMART iq_5 164 186 IPR000048 GO:0005515
Lele20g0850 645 SMART iq_5 187 208 IPR000048 GO:0005515
Lele20g0850 645 Pfam Protein of unknown function (DUF4005) 548 625 IPR025064 -
Lele20g0850 645 MobiDBLite consensus disorder prediction 311 366 - -
Lele20g0850 645 ProSiteProfiles IQ motif profile. 165 193 IPR000048 GO:0005515
Lele20g0850 645 MobiDBLite consensus disorder prediction 595 635 - -
Lele20g0850 645 MobiDBLite consensus disorder prediction 550 565 - -
Lele20g0850 645 MobiDBLite consensus disorder prediction 338 355 - -
Lele20g0850 645 Pfam IQ calmodulin-binding motif 167 186 IPR000048 GO:0005515
Lele20g0850 645 Pfam IQ calmodulin-binding motif 189 206 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0850 Lele-ChrLele20 15133968 15139457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0850 68 645 IQD Protein Family AT1G74690 42.251 1.14e-123 377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0962 17 20574783 20579629 Lele20g0850 20 15133968 15139457 hybridization
Lele18g0570 18 3362830 3368401 Lele20g0850 20 15133968 15139457 hybridization