Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0837 ATGAAGAAGAGACAGGTGGTCGTGAAGAGAGATGTCGCCAAGACTTCGTCGTCGGTCATGAGGAACGTCAGATATTTGGAGTGTCAGAAGAATCACGCCGCCAACATGGGAGGCTACGCCGTCGATGGTTGTAGAGAGTTCATGGCCAGTGGTGATGACGTCACTGCCGGAGCTCTTACCTGTGCTGCTTGCGGCTGTCACAGGAATTTCCACAGAAGAGAAGTTCAAACTGAGGTTGTCTGTGAGTACTCTCCTCCTAATTCCGCTCGCTAA 273 0.5165 MKKRQVVVKRDVAKTSSSVMRNVRYLECQKNHAANMGGYAVDGCREFMASGDDVTAGALTCAACGCHRNFHRREVQTEVVCEYSPPNSAR 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0837 90 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 25 74 IPR006456 -
Lele20g0837 90 Pfam ZF-HD protein dimerisation region 22 75 IPR006456 -
Lele20g0837 90 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 5 78 - -
Lele20g0837 90 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 24 75 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0837 Lele-ChrLele20 15046306 15046578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0837 1 88 Zinc finger-homeobox gene family AT1G18835 77.528 2.42e-43 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele20g0837 ZF-HD_dimer 1.4e-29 No_clan