Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0828 ATGGAAAACGTTGTTGGACTCTGTAAGGAAGAAGAGAAAATGAATTTGCCTCCTGGATTTCGGTTTCATCCAACTGATGAAGAGCTTATAAGCCATTACCTGTACAAGAAGGTTACTGATCCAAGCTTCTCAGCCAGGGCCATTGGGGAAGTGGACTTGAACAGGTCTGAGCCTTGGGATTTGCCAATGAAAGCCAAAATGGGAGAAAAAGAGTGGTACTTCTTCTGCGTGAGAGACCGAAAATACCCAACTGGTTTGAGAACCAACAGGGCCACTGAAACAGGATACTGGAAAGCCACTGGTAAAGATAAAGATATTTACAGAGGAAAATCGCTGGTGGGAATGAAGAAAACTCTGGTTTTCTACAGAGGACGAGCACCCAAAGGAGAGAAGACCTACTGGGTCATGCACGAATACAGATTAGAGGGTAAATTCTCTGTCCACAACCTCCCTAAAACCGCAAAGAATGAGTGGGTGATTTGCAGGGTTTTTCAAAAAGGTTCAAGTGGTAAGAAAACCCATATTTCTGGGATGATGAGGCTGGATTCTCTTGGAAATGAATTGGGTTCTTCTGGTTTACCTCCATTGACAGATTCGTCACCTTTCCCTGGCAACAAAACCAAACCTGTCCCAGAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATCGATGTTCAGAGAACCAACAACCAAGGAGGGATCTTTGATTCCTACAGCAACTTCCCTAATTATGGGGTTTCTTCGAATCCCTCAGACACCCTCCCCAGAATCCCACTTTCTGCTGGTTCGTTATATTCCACTCAACCGAATCAAGCTCCTTCGAGTTTAGCTTTACCCAGTTCTATTTATGGCCTGCAAGACCAGACCCTGGTCAGAGCCTTGCTTGAAAACCAAGAATCAAACAGGAACAATTTCAAGCCCGAGGGGGACATGGTCAGTATGTCTCAAGAAACAGGTCTTACTGCTGACATAAACCCAGAAATCTCCTCGGTCATGTCCAATCTTGATGTGAGTCGAAAAGCCTTTGACAATCAGCAGCAGCAGCAACAGACTGCTTCATCTGTAGCAATGGAGTACGAAGGTTTGTGGACTTACTCAGTTCAGATTTAA 1110 0.4505 MENVVGLCKEEEKMNLPPGFRFHPTDEELISHYLYKKVTDPSFSARAIGEVDLNRSEPWDLPMKAKMGEKEWYFFCVRDRKYPTGLRTNRATETGYWKATGKDKDIYRGKSLVGMKKTLVFYRGRAPKGEKTYWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKGSSGKKTHISGMMRLDSLGNELGSSGLPPLTDSSPFPGNKTKPVPESAYVPCFSNPIDVQRTNNQGGIFDSYSNFPNYGVSSNPSDTLPRIPLSAGSLYSTQPNQAPSSLALPSSIYGLQDQTLVRALLENQESNRNNFKPEGDMVSMSQETGLTADINPEISSVMSNLDVSRKAFDNQQQQQQTASSVAMEYEGLWTYSVQI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0828 369 FunFam NAC domain-containing protein 100-like 25 170 - -
Lele20g0828 369 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Lele20g0828 369 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Lele20g0828 369 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 305 - -
Lele20g0828 369 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Lele20g0828 369 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0828 Lele-ChrLele20 14973681 14974997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0828 14 365 NAC Transcription Factor Family AT5G07680 57.627 8.18e-128 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele20g0828 NAM 3.1e-39 No_clan