Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0813 ATGTCAGAGCATGTAACAGATTCCTTGGGCTTACTATTAATATGTTCCTTAATCCTTTTCTCAGCGGGTGAAATAGTTGCCGGAGATTCTCTGGACACAGACAGAGAAGTTTTGCTTCAGCTTAAATTGTACCTCAACAATCAAACTCTAGTAGACCAAGGACGATACACAAACTGGAACACGACAAGTTCAAATCCTTGTGAATGGTCGGGAATCTGGTGCAGCGGCAGCAATGGAACAACAACAACGAGGAGGAGGGTGGTCGGAGTCGACCTCTCCGACAACAAAATCACCGGCGGGATATTCCAGAACTTCTCTCAGCTCACTCATCTCACACACCTTGACCTTGCCCGGAACACACTCTCCGGTGAGATTCCGGCGGACTTGAGGCGGTGCAAAAAGCTCGTGTATCTCAATCTCTCCCACAATATTCTTCCCGAGGAGTTGAATTTAATCGGCTTAACAAACCTACAAACTCTTGACTTATCAGGCAACAGGCTTCATGGCGATCTTGGGTTGAATTTCCCAGCCATTTGTGACAATCTGATCAGTTTGAATATCTCAGGGAATAACTTCACTGGTAGGATCGATGAATGCTTCAATCAGTGTTCGAAATTGCAGCACTTGGATTTGAGCACTAATAAGCTGAGTGGGGATATATGGATGGGAATTATGAAGCTGAGAAAGTTTTCTGTTTCAGAGAATTTTCTCAGCGGGAAAATTCCTCCGTCAGCTTTTCCGGCACAGTGCAATCTTCAAGTTCTTGACATTTCAGAAAACATATTCACAGGGAATGTTCCTGAGGAGCTTGCTAACTGCAAGGATTTAACGATTCTGAATCTCTCTAGCAACAAGTTCAACGGATCAATACCTAAAGAAATTGGTTCAATTTCTGGGATTGAAGCATTGTACTTGGGGAACAACAGTTTCTCAAGAGATATCCCAGAAGAACTCTTGAACTTGACCAATTTGGCATTCTTGGATTTAACTAGAAACCAATTTGGTGGGGACATACAAGAGATATTTGGGAAATTCAAGCAGGTGAAGTATCTTCTTTTACACTCAAATTCTTACACTGGAGGATTATCTTCATCAGGAATTCTCAAATTACCAAACATTTTACGCTTAGACCTAAGCTACAACAATTTCTCAGGTCCATTACCCACAGAAATCTCTCAAATGTCAAGCCTCAAATTATTAATGCTAGCCTACAATCGATTCATTGGATTTATTCCATCTGAATTTGGAAATTTGCCTCATCTTCAAGGTCTTGACTTATCATTCAACAACTTATCTGGGCCAATTCCACCAGCTCTTGGAAACTTAACCTCCCTTTTATGGCTCATGCTTGCGAATAATTCATTAACAGGTGAAATCCCAAGAGAGCTGGGGAACTGTTCGAGCTTATTATGGCTGAATCTTGCAAATAATAAACTCACAGGAAAATTCCCACCTGAATTGACCAATATAGGAAGAAACGCCATGGTCACATTTGAATCAAATAGGCAATATGATACAGTTAGTGCTGGTTCTGGTGAGTGCTTAGCCATGAAGAGATGGATTCCTGCAGATTACCCTCCGTTTAGTTTTGTTTATGACATTCTTACGAGGAGGAATTGCAGAAGAATTTGGGACAGATTGCTTAAAGGGTATGGGATTTTCGCGATTTGCAGTGCAGTTTCATTTTCATCAATGTCTCAAATCTCTGGTTATGTTCAGTTAAGTGGGAACCAACTCTCAGGTGAAGTTCCTCCAGAAATTGGAACGATGCAGAACTTGAGCATGTTGCATTTAGGGCTTAATAAATTTTCTGGGAAACTACCTGTAGAGGTGAAAAATATGCCGCTTGTGGTGTTGAACATAACAAGAAACGAGTTTTCTGGGGACATTCCTAGGGAAATTGGAACCATGAAGTGTTTACTGAACCTTGATCTCTCCTACAACAATTTTTCTGGGGTTTTCCCTTCAAGTTTGAACAACTTGACAGAGCTCAGCAAGTTCAACATTTCTTATAATCCCTTGATTTCAGGTGAGATTCCATCGTTAGGACAACTAGCTACGTTCGAGAAAAACTCATATTTGGGGAATCCCCTTTTGGATCTTCCGAGTTTCATCGACAACTCCCCCGATCATCAGAAAAACACGACCTTTCGTAACAGAGCCATAAAAAAATCCATGAATCTCTCTGTTTTCATGGCGTTCTTTGCTCTCATTCTGGCTTTCTTAGTATTCGGTCTTCTGACTATCATAGTCTGTTTGCTGATAAAAACCCCGTCGGAAGAACCACTCCTGAGAGACATAAAACTCGACCATGAGTCTGGAACCTCGTCCCCATGGTTGTCGAACACAGTTAAGGTTATTCGATTGGACAGGACAGCTTTCACACACGCCGACATCTTGAAAGCCACCGGAAACTTCTCAGAGGACAGAATCATAGGCAAAGGAGGCTTCGGAACGGTGTACAGAGGAATATTTTCAGATGGGAGAGAAGTGGCAGTGAAAAAACTCCAAAGAGAAGGACTTGAAGGCGAAAAAGAATTCAGAGCAGAAATGGAAGTTCTAAGCGGCCATGGCTTCGGTTGGCCCCACCCAAACCTCGTCACACTCTATGGTTGGTGCCTCGACGGTTTAGAAAAAATACTGGTTTACGAATACATTTCTGGTGGAAGCTTAGAAGATCTCGTAACCGACAGATTAAAATTCACTTGGAGACGACGGCTAGAAGTAGCCATTGACGTTGCTCGAGCCTTGGTTTACTTACACCACGAATGTTACCCTTCAATCGTTCACAGAGATGTGAAGGCAAGCAATGTGTTGTTGGACAAAAAAACAGGGAAGGCCAAAGTTACGGACTTTGGACTAGCCAGAGTGGTTGACGTCGGAGACAGCCACGTCAGCACGATGGTGGCAGGGACGGTGGGGTACGTGGCGCCGGAGTACGGCCACACATGGAAGGCGACGACGAAAGGGGACGTGTACAGCTATGGAGTGTTGGCTATGGAGTTGGCGACTGGAAGAAGAGCATTGGACGGAGGGGAAGAGTGTTTGGTGGAATGGGGAAGGAGGGTTATGGGTCACGGAAGAAATAGGCGCCGGCCGGTGATTCCGGTGGCGCTGATGGGTTCTGGTTTGCTTGAAGGTATGGAGGAGATGATGGAGCTGTTAAGGATAGGGGTGAGATGCACGGCGGAGACACCGCAGGCTCGGCCGACGGTGAAGGAGGTTTTGGATATGCTGATCAAGGTGTATAACCTCAAGGGCGATTCAAGCTATGAACATCTGAGTCATTAA 3291 0.4412 MSEHVTDSLGLLLICSLILFSAGEIVAGDSLDTDREVLLQLKLYLNNQTLVDQGRYTNWNTTSSNPCEWSGIWCSGSNGTTTTRRRVVGVDLSDNKITGGIFQNFSQLTHLTHLDLARNTLSGEIPADLRRCKKLVYLNLSHNILPEELNLIGLTNLQTLDLSGNRLHGDLGLNFPAICDNLISLNISGNNFTGRIDECFNQCSKLQHLDLSTNKLSGDIWMGIMKLRKFSVSENFLSGKIPPSAFPAQCNLQVLDISENIFTGNVPEELANCKDLTILNLSSNKFNGSIPKEIGSISGIEALYLGNNSFSRDIPEELLNLTNLAFLDLTRNQFGGDIQEIFGKFKQVKYLLLHSNSYTGGLSSSGILKLPNILRLDLSYNNFSGPLPTEISQMSSLKLLMLAYNRFIGFIPSEFGNLPHLQGLDLSFNNLSGPIPPALGNLTSLLWLMLANNSLTGEIPRELGNCSSLLWLNLANNKLTGKFPPELTNIGRNAMVTFESNRQYDTVSAGSGECLAMKRWIPADYPPFSFVYDILTRRNCRRIWDRLLKGYGIFAICSAVSFSSMSQISGYVQLSGNQLSGEVPPEIGTMQNLSMLHLGLNKFSGKLPVEVKNMPLVVLNITRNEFSGDIPREIGTMKCLLNLDLSYNNFSGVFPSSLNNLTELSKFNISYNPLISGEIPSLGQLATFEKNSYLGNPLLDLPSFIDNSPDHQKNTTFRNRAIKKSMNLSVFMAFFALILAFLVFGLLTIIVCLLIKTPSEEPLLRDIKLDHESGTSSPWLSNTVKVIRLDRTAFTHADILKATGNFSEDRIIGKGGFGTVYRGIFSDGREVAVKKLQREGLEGEKEFRAEMEVLSGHGFGWPHPNLVTLYGWCLDGLEKILVYEYISGGSLEDLVTDRLKFTWRRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDKKTGKAKVTDFGLARVVDVGDSHVSTMVAGTVGYVAPEYGHTWKATTKGDVYSYGVLAMELATGRRALDGGEECLVEWGRRVMGHGRNRRRPVIPVALMGSGLLEGMEEMMELLRIGVRCTAETPQARPTVKEVLDMLIKVYNLKGDSSYEHLSH 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0813 1096 Gene3D Ribonuclease Inhibitor 556 716 IPR032675 -
Lele20g0813 1096 ProSiteProfiles Protein kinase domain profile. 806 1096 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0813 1096 Gene3D Transferase(Phosphotransferase) domain 1 886 1088 - -
Lele20g0813 1096 SUPERFAMILY L domain-like 572 706 - -
Lele20g0813 1096 ProSitePatterns Protein kinases ATP-binding region signature. 812 835 IPR017441 GO:0005524
Lele20g0813 1096 PRINTS Leucine-rich repeat signature 154 167 - -
Lele20g0813 1096 PRINTS Leucine-rich repeat signature 111 124 - -
Lele20g0813 1096 Pfam Leucine rich repeat 226 286 IPR001611 GO:0005515
Lele20g0813 1096 Pfam Leucine rich repeat 90 143 IPR001611 GO:0005515
Lele20g0813 1096 Pfam Leucine rich repeat 155 216 IPR001611 GO:0005515
Lele20g0813 1096 SMART LRR_typ_2 154 185 IPR003591 -
Lele20g0813 1096 SMART LRR_typ_2 637 660 IPR003591 -
Lele20g0813 1096 SMART LRR_typ_2 442 466 IPR003591 -
Lele20g0813 1096 SMART LRR_typ_2 108 132 IPR003591 -
Lele20g0813 1096 SMART LRR_typ_2 418 441 IPR003591 -
Lele20g0813 1096 SMART LRR_typ_2 370 394 IPR003591 -
Lele20g0813 1096 SMART LRR_typ_2 321 344 IPR003591 -
Lele20g0813 1096 Gene3D Ribonuclease Inhibitor 31 314 IPR032675 -
Lele20g0813 1096 CDD STKc_IRAK 812 1081 - -
Lele20g0813 1096 Pfam Protein kinase domain 807 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0813 1096 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 243 338 - -
Lele20g0813 1096 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 886 1086 - -
Lele20g0813 1096 ProSitePatterns Serine/Threonine protein kinases active-site signature. 928 940 IPR008271 GO:0004672|GO:0006468
Lele20g0813 1096 SUPERFAMILY L domain-like 226 485 - -
Lele20g0813 1096 Gene3D Ribonuclease Inhibitor 412 510 IPR032675 -
Lele20g0813 1096 Gene3D Ribonuclease Inhibitor 315 411 IPR032675 -
Lele20g0813 1096 SUPERFAMILY RNI-like 86 291 - -
Lele20g0813 1096 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 250 1081 - -
Lele20g0813 1096 SMART serkin_6 806 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0813 1096 FunFam Putative LRR receptor-like serine/threonine-protein kinase 345 506 - -
Lele20g0813 1096 ProSiteProfiles Leucine-rich repeat profile. 134 155 IPR001611 GO:0005515
Lele20g0813 1096 Pfam Leucine rich repeat N-terminal domain 32 75 IPR013210 -
Lele20g0813 1096 FunFam Leucine-rich repeat receptor protein kinase MSP1 769 885 - -
Lele20g0813 1096 Gene3D Phosphorylase Kinase; domain 1 773 885 - -
Lele20g0813 1096 SUPERFAMILY Protein kinase-like (PK-like) 789 1079 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0813 Lele-ChrLele20 14875993 14879494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0813 48 1082 Receptor kinase-like Gene Family AT4G39400 32.483 5.81e-151 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Lele20g0813 Pkinase 4.9e-44 CL0016