Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0809 ATGACTGAGCCTCTGCTTCTAAACTCCGTTCTCCCACCTCAACAAAGACAAGTCGATTCCTCTTCTCACGTGCACACCCTCCCTCCGGTCCCCATGTCTAATTATGAGGTTGCAGAGCTAACCTGGGAAAACGAATGTGAACCCAGTAGTGGAGGTTGTGCTAGTGTCAGTGCCACATTCTGTAGGAGCTTCAAGAGAAGTAAAACACTTGAGGATGATTCTCCTTCCCTCTGTGAATCGGAAAACCAAGACCAAGAAGAAGACAGAGACACCAAGGAAGAAACAGGCCGTTCCAACTCAACAAGAAGAAATCGAGCAGCCGCGATCCATAACCAGAGTGAGCGGAGACGAAGGGATAGAATTAATCAGAAAATGAAAGCTTTGCAGAGGTTGGTGCCCAACGCCAGCAAGAATGACAAAGCTTCAATATTAGACGAAGTGATTGAATACTTAAAGCAGCTGCAAGCACAGATACAGATGATGAGTATGAGAAACATGCCTCAGCAGATGATGATGATGATGATGCAACAACAGCTTCAGATGTCTATGATGGCCAGAATGGGCCTTGCACTGGGCCCGGGCTCGGCCCAAGGCCTAGGCTTAGCAGGCCTGCTTAACACCAACACCACCATGGCTGCACGCCCACCAGTTCTTGCTTCTCTTCCACAACTCACAGTTGCAGCAGCTCCTACTATTACTCCTTCCTTCATGATGTCTCCATTGGTTCAAGCCCATGCACCTCCTCCTCCAAAGCCTGAACCTGCATCTGCAGCCACCTCCAATGTCTCAGTTTCTTTGCCTGATCCTTATGCCACTTTTCTTTCACAATCAGTGAATATGGATATTCTGAGCAACATGGCGGCGCTTTACCGGCAGCAGATGAGAGAGAACAATCAGAACATGAGCGGCCTGTCCCAACAACAACATCATGGACAAGGGAATTGA 945 0.4847 MTEPLLLNSVLPPQQRQVDSSSHVHTLPPVPMSNYEVAELTWENECEPSSGGCASVSATFCRSFKRSKTLEDDSPSLCESENQDQEEDRDTKEETGRSNSTRRNRAAAIHNQSERRRRDRINQKMKALQRLVPNASKNDKASILDEVIEYLKQLQAQIQMMSMRNMPQQMMMMMMQQQLQMSMMARMGLALGPGSAQGLGLAGLLNTNTTMAARPPVLASLPQLTVAAAPTITPSFMMSPLVQAHAPPPPKPEPASAATSNVSVSLPDPYATFLSQSVNMDILSNMAALYRQQMRENNQNMSGLSQQQHHGQGN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0809 314 MobiDBLite consensus disorder prediction 1 29 - -
Lele20g0809 314 Pfam Helix-loop-helix DNA-binding domain 110 155 IPR011598 GO:0046983
Lele20g0809 314 CDD bHLH_AtPIF_like 105 165 - -
Lele20g0809 314 Gene3D - 100 165 IPR036638 GO:0046983
Lele20g0809 314 SMART finulus 111 160 IPR011598 GO:0046983
Lele20g0809 314 Coils Coil 111 138 - -
Lele20g0809 314 MobiDBLite consensus disorder prediction 70 120 - -
Lele20g0809 314 MobiDBLite consensus disorder prediction 7 28 - -
Lele20g0809 314 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 105 154 IPR011598 GO:0046983
Lele20g0809 314 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 41 300 IPR031066 -
Lele20g0809 314 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 103 174 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0809 Lele-ChrLele20 14849924 14852721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0809 72 167 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 67.010 1.21e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele20g0809 HLH 8.8e-15 No_clan