Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0773 ATGGAAACGGCAATGGTTGCAAGCGTCGCAGCGAGAAGAAGCCTCTGGCGTATCCTCCAATGTCGTGCTCATTGCTTGTCAACGGTTTCCGGTTCTATCGACCGATTTCATCCAAAATTATCTCAGCAATCTCAGTACAGGAAAGAGATTTCACTTGCCAATCTCTTCCAAAGGTACGGGTTCCCACCATCACAGATTCAAGGTTTTCTCGCAAAGAATCGTTTTCTGTTGAATTCCAATTTACAAGAGTTAGAGAAGTGTCTGGCTACTCTATTATCATTCAGGATTCCGCAAAGCTCTCTCATTTCTCTGGTACGCGATTGTCCTGGGATATTGGAACACTATTTTCTCAAGAAATGGGAAGCATGTTTCTCACAACTGCACGTTTTGACTCCTTCCCCACTTATGATCAGAAATTTCTTACAATACTCTCGGAGGTATCAGCTAGACCCTGCTGAACTTCCAAAAAGCATTGAGATCTTTAGGGGTTCAGGCTTTACGCATGTTGCTATAGCTCGGGTTTTCGAGGACTTTCCTCCTGTAGTCGTGATGACTAAGGGAGAAATTCTTTCGATAATTGAATTTCTCATTGAAATTGGGGTTCCCAGGGACAAGATTGATCGAGTCATAACTTTGCATCCTAGAGTTTTGGGGCTTGGGATCGAAGACCGGTTGAAGCCGTTGCTCTGTGAGTTGAGCGATTTGGGATTTTCTGATGATGAGATTATAAAAGAGATAATTAAGGAGCCCAAGATTCTGGGAATGGAACTAGGGGAATTTTCACGATGTTTACAATTGCTCAAGACCTTGAAATGTAGAGAAGCGATCAAAGAGAAGATTTTCCAAGAGGGTATGCTGAGAGGTGGTTTTGAAGTAAAATTGAGAGTAGATTGCTTGTGCAGTCACGGTTTAATTCGTAGAGATGCTTTCAAGGTCTTGTGGAAAGAACCGAGGTTGATTACATATAACTTAGAGAACATTGAAAAGAAGATTGACTTTTTAGTGCACAGAATGGAATATAGTGTGGATTGTTTACCTGATGTTCCAGAATATTTGGGTGTAAATTTCGAGAAGCAGATTGTTCCTCGACACAGTGTGATGGAGTATTTGAAAGCAAAAGGTGCAATTGACTTTGAGGTGAGATTGAAGGATTTGATTAAGCCAAGCAGACTTGGATTTTACAATCTATATGTCAAGCCCTACCCAGAATGTGAAAAATTGTACGGGAGATTTTCAAGAAATGTTGAAGTTAAAAGCAAGCATCCAACTGGACTCTGGAAAATCTTTAAACCACAAAAGTTCCCTGAAACCAACGAAGATGTGAAGAACATGAAGTCCTTTATGGACGGAGTAGTGTAG 1359 0.4106 METAMVASVAARRSLWRILQCRAHCLSTVSGSIDRFHPKLSQQSQYRKEISLANLFQRYGFPPSQIQGFLAKNRFLLNSNLQELEKCLATLLSFRIPQSSLISLVRDCPGILEHYFLKKWEACFSQLHVLTPSPLMIRNFLQYSRRYQLDPAELPKSIEIFRGSGFTHVAIARVFEDFPPVVVMTKGEILSIIEFLIEIGVPRDKIDRVITLHPRVLGLGIEDRLKPLLCELSDLGFSDDEIIKEIIKEPKILGMELGEFSRCLQLLKTLKCREAIKEKIFQEGMLRGGFEVKLRVDCLCSHGLIRRDAFKVLWKEPRLITYNLENIEKKIDFLVHRMEYSVDCLPDVPEYLGVNFEKQIVPRHSVMEYLKAKGAIDFEVRLKDLIKPSRLGFYNLYVKPYPECEKLYGRFSRNVEVKSKHPTGLWKIFKPQKFPETNEDVKNMKSFMDGVV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0773 452 Pfam mTERF 295 386 IPR003690 GO:0003690|GO:0006355
Lele20g0773 452 Pfam mTERF 142 262 IPR003690 GO:0003690|GO:0006355
Lele20g0773 452 Pfam mTERF 193 325 IPR003690 GO:0003690|GO:0006355
Lele20g0773 452 Gene3D Transcription termination factor 3, mitochondrial 185 414 IPR038538 -
Lele20g0773 452 PANTHER CGI-12 PROTEIN-RELATED 45 400 IPR003690 GO:0003690|GO:0006355
Lele20g0773 452 SMART mt_12 67 97 IPR003690 GO:0003690|GO:0006355
Lele20g0773 452 SMART mt_12 342 376 IPR003690 GO:0003690|GO:0006355
Lele20g0773 452 SMART mt_12 243 273 IPR003690 GO:0003690|GO:0006355
Lele20g0773 452 SMART mt_12 172 202 IPR003690 GO:0003690|GO:0006355
Lele20g0773 452 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Lele20g0773 452 SMART mt_12 310 341 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0773 Lele-ChrLele20 14633426 14634784 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele20g0773 mTERF 8.5e-25 No_clan