Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0768 ATGCACATCCCTACTAAGCGAAGCGAAAAAGGCCGTGAAAAAGCTCTTGACGGGTGCTCAGTCTCTGTGTCCCTAAAAATAGAAACATCAAGCTCTTCCATTTCCATGGAGTTTGGGGCACTCTCTGAAACCCGCTTCAGTTTAATCCTGCCTCTGCCTCTGCCTCCTCCCCATTTCGCAATCCCACTCGTACAATGGGCTTCTTTGCTTTCTCATGCTGAAATGGAGTCTTGGAGTTATGATTCTGAAGAAAAGGGGTTTGTGTCTAACGATACACTCTCACCTCCTAATTCACTTTCCAGAAGTAAAGGTTCCATCTTGGGATGGGAATTGAAGAGTCCCTCTGGAATTTCCAGCGACATGTTATCCTCGGGTCAACCAAACGTAGGAAATCAAGGTTTTGAGGAAATGGGTTTTCCAGAAATGTTGGGTAAACAATTGTCCGATGATCCAATTAGCACTGTATCCAACAGAAAGCTCGAAGGCCCTTTTATGACTGCTGCCCCTATTGCGATTTCTGCAGTGGAAGACTCCAATTCGAAGCTTTCTAACTCCGTGGTTGAATCTAACGGTCGAGATTCACTCATTGATTTGAAGCTGGGACGATTTGGCGATCCCAGAGAAGCCATGGGTTCAGCATTCTCCAGAGGAACGCCTATTTTGTCTTCTTCAGAATCATCGGCTCCGACCAAGAGGGTACGAGGTTCGGGGGTTCATTCACAAATCGCGTACTGTCAAGTTTATGGGTGTAACAAGGATCTAAGCGCCTCTAAAGACTACCACAAGAGGCACAAAGTTTGCGAGGTTCACTCCAAGACTTCCAAAGTTATAGTCAACGGCATCGAACAAAGATTTTGTCAGCAATGTAGTAGGTTTCACTTGCTTGCTGAATTTGATGATGGTAAGCGCAGCTGTCGCAAACGCCTTGCAGGTCATAACGAGCGCCGGCGAAAGCCACAAGTTGGTATTCACTCTGGAAAGGCTGGAAGATTGCTTCAATCATGCAGTGATGGTAGATTCCAGAGCACCATGCTAACAACTGCATCTTTTATCTGCCAAGAGATGCGTCCTACCGGGACTTTGCTCTTTGATAAATATGGAACGAATGACTGGTGGAGACCTATAAAGAATGAAGATGGGACTGATTTTAGGCATCTGCCTGCTGTTCCTATCACAAATGGACACCCTCAGTCAAGATCTCTATTCCATCCGTTTAATGAAAGGCAATTTCCTTTTCTTCATGAAAATGGTGCTACATCCAGTACGGGAAGCATCTTCTGTGAGAACAACAGCCAGTATCCACCTCCTGCCATGGGTCCAAGTTCTGGGGCACAATCTTTATTCCAAGACACTTCCTTAAGAAGTGAGGACTTCAATGTTTATGATGCTACATCTGCAATTCGGGGACTATCGGGAGTTTCAGACTCTGGCTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAACTCTTCAAGCCACTCATCAGTAATCCCCATGGCTCGCCCCTTGGTCCTTCCAAGCAGTAGCCATAGTAATTACAGGCCGAGTCAGCTCACCGAGAAACTCATAGGAATGAACTCACAGGCTTCTACAAGTGCAGGAGTTTCAGATAGGTTTCGATCCGAGATGAATCCTGCCACCACCGATGGAAGTCATCTTAGTCCTGTACTGATACCAGACAATAGTAACATTCTCCATTTTGAAATGGCAGATGGGATGTTCCAAGGGCCAGGTTTTGTGAACATGAAAGACGGTCTTTCATGTGAAGATGGCCCAACCATTGACTTGCTTCAACTATCATCACAACTTCAGCGAGTTGATCATCAGAGGCAATCATCGCAGGTGAAGCGAGAAAATGCTTCTTCCTCCTATCTTCGGACTACTTAA 1887 0.4589 MHIPTKRSEKGREKALDGCSVSVSLKIETSSSSISMEFGALSETRFSLILPLPLPPPHFAIPLVQWASLLSHAEMESWSYDSEEKGFVSNDTLSPPNSLSRSKGSILGWELKSPSGISSDMLSSGQPNVGNQGFEEMGFPEMLGKQLSDDPISTVSNRKLEGPFMTAAPIAISAVEDSNSKLSNSVVESNGRDSLIDLKLGRFGDPREAMGSAFSRGTPILSSSESSAPTKRVRGSGVHSQIAYCQVYGCNKDLSASKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVGIHSGKAGRLLQSCSDGRFQSTMLTTASFICQEMRPTGTLLFDKYGTNDWWRPIKNEDGTDFRHLPAVPITNGHPQSRSLFHPFNERQFPFLHENGATSSTGSIFCENNSQYPPPAMGPSSGAQSLFQDTSLRSEDFNVYDATSAIRGLSGVSDSGCALSLLSSQSQNSSSHSSVIPMARPLVLPSSSHSNYRPSQLTEKLIGMNSQASTSAGVSDRFRSEMNPATTDGSHLSPVLIPDNSNILHFEMADGMFQGPGFVNMKDGLSCEDGPTIDLLQLSSQLQRVDHQRQSSQVKRENASSSYLRTT 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0768 628 MobiDBLite consensus disorder prediction 525 555 - -
Lele20g0768 628 MobiDBLite consensus disorder prediction 216 233 - -
Lele20g0768 628 FunFam Squamosa promoter-binding-like protein 14 236 306 - -
Lele20g0768 628 Pfam SBP domain 245 318 IPR004333 GO:0003677
Lele20g0768 628 ProSiteProfiles Zinc finger SBP-type profile. 242 319 IPR004333 GO:0003677
Lele20g0768 628 MobiDBLite consensus disorder prediction 605 628 - -
Lele20g0768 628 MobiDBLite consensus disorder prediction 214 233 - -
Lele20g0768 628 Gene3D - 235 306 IPR036893 GO:0003677|GO:0005634
Lele20g0768 628 SUPERFAMILY SBT domain 243 323 IPR036893 GO:0003677|GO:0005634
Lele20g0768 628 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 105 615 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0768 Lele-ChrLele20 14604759 14608434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0768 196 363 SBP-box Gene Family AT1G69170 55.357 5.04e-50 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele20g0768 SBP 1.9e-31 No_clan