Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0760 ATGGAGCTCCCTCAAGCGCGTCCCTTTGGAACCGAAGCAAGAAAACCGACGCATGACTTTCTGTCACTATACAATCATTCAACTGCCCAACAAGATCCGAGGCCACCACCATCTCAAGGAAGTTACCTGAAAACGCATGATTTCTTGCAGCCACTACTAGAACGTGTTGAGAAGAAAGCAAACGCGAAGGAAGAAGCATCGGATGAGATATCATCAGGGGTTCAAAAGCCACCACCTCCTGCTCCACCGCCGCCGCCGACACCATGTGTTGAGCACATTCTACCTGGAGGCATTGGGACTTACAGTATCAGCCACATTTCGTATTTTAGTAATCCCAGGGTTCCAAAGCCGGAGGCTTCTCCCCTTTTCACTGTGTCTCCTTGTGAAGCAAGTACAGATAGACATGAGGAGCACTCCAACTGCAGTTCATATACTGGAAGTGGTTTCACTTTGTGGGAAGAATCTGCCGTTAACAAGGGAAAGACAGGGAAGGAGAATGACGTGGGAGAGAAACCCGTTGTAGCAGAGTGTGCAGGCAAGCCAGGGCAGTGGTCGTTGACTGAGAGAGCATCTCAGTCATTTGTTAAGAATAATCAAAATAGCTTCAGTTCCATCACTTCCACTCAGAAAAGTGGGCAGAAGAACCAGAATTTTATTGATATGATCAAATCCGCCAAGGATTGCTCTCAGGATGACGAGCTAGACAATGAAGAAGCATTTATTTGTAAGGAATCCTCAACTACCCAAAGAGGAGAATTGAGAGTGAAAGTGGATGGGAAGAGTTCTGATCAAAGGCCAAACACACCGCGATCAAAACATTCGGCAACAGAACAGCGTAGAAGGAGCAAAATTAATGACAGATTCCAGATGTTGAGAGAGCTTATTCCACATAGTGACCAGAAAAGAGACAAGGCATCTTTTCTGTTGGAGGTCATTGAGTACATTCAATTTTTGCAAGAAAAAGTTCATAAACACGAAGGTTCATACCAAGTTTGGAATCAAGAGAAAGAAAAATCGACTCCATGGAGGAATAATCACAGGCCTTCAGAAAGCTATGATGATCAATCTCGTGTAATAAATAGTGGATCAGGTCCTTCTTCAATATTACTGTTTCCTTCAAAGATGGAGGAGGAAAATTTTAGTATCTCCCCAACAATTACTGGGGGCACAAAGAACGTAGATGCTGGCACTAGTTCCGCAACTACATTGAAGGCAATGGATCAACATCCTGGAATAACCAATAAAGCCATGCCAATGCCTAACTCTTCACAGCCAAAGTTCCTAAATCCTGGCCAAAGTGGCTGTCCAGGTAGATTGGGGTCTCAGCTTACTCACAGGCTAACCGCAGATGCTGAAAACACCATATATAATCCCTTAGGATCATGTCAGACCCACTCTTCTGCTACAGGGGTGAATGCTGCTAGTGACAAGCTTAAAGAGAAAGAGCTCACTGTTGAAAGCGGTGCCATTAGCATATCAAGTGTGTACTCAAAAGGGTTGTTGGATTCACTAACACAAGCACTGAAGAATTCAGGAGTCAATATGTCACAAGCTAGCATCTCAGTTCAAATTGAGCTTGGTAAGCAAGCAAACGTCAGACAGATTGGACCAACTTCTGGGGTTAAGGATGAAGTTACTTCTAGAAATCAAGGGATGATAAAGCGCTCTAGAGTTTGTAGAGAGGAGACTGACCTAGCAGTAAAGAAAAAGACAAGCAGAAGTTGA 1725 0.4423 MELPQARPFGTEARKPTHDFLSLYNHSTAQQDPRPPPSQGSYLKTHDFLQPLLERVEKKANAKEEASDEISSGVQKPPPPAPPPPPTPCVEHILPGGIGTYSISHISYFSNPRVPKPEASPLFTVSPCEASTDRHEEHSNCSSYTGSGFTLWEESAVNKGKTGKENDVGEKPVVAECAGKPGQWSLTERASQSFVKNNQNSFSSITSTQKSGQKNQNFIDMIKSAKDCSQDDELDNEEAFICKESSTTQRGELRVKVDGKSSDQRPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIQFLQEKVHKHEGSYQVWNQEKEKSTPWRNNHRPSESYDDQSRVINSGSGPSSILLFPSKMEEENFSISPTITGGTKNVDAGTSSATTLKAMDQHPGITNKAMPMPNSSQPKFLNPGQSGCPGRLGSQLTHRLTADAENTIYNPLGSCQTHSSATGVNAASDKLKEKELTVESGAISISSVYSKGLLDSLTQALKNSGVNMSQASISVQIELGKQANVRQIGPTSGVKDEVTSRNQGMIKRSRVCREETDLAVKKKTSRS 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0760 574 CDD bHLH_AtBIM_like 267 343 - -
Lele20g0760 574 MobiDBLite consensus disorder prediction 50 70 - -
Lele20g0760 574 MobiDBLite consensus disorder prediction 256 284 - -
Lele20g0760 574 MobiDBLite consensus disorder prediction 1 94 - -
Lele20g0760 574 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 266 335 IPR036638 GO:0046983
Lele20g0760 574 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 12 569 IPR044295 GO:0003700|GO:0006351|GO:0046983
Lele20g0760 574 MobiDBLite consensus disorder prediction 21 38 - -
Lele20g0760 574 MobiDBLite consensus disorder prediction 75 91 - -
Lele20g0760 574 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 268 318 IPR011598 GO:0046983
Lele20g0760 574 MobiDBLite consensus disorder prediction 339 353 - -
Lele20g0760 574 FunFam BHLH domain class transcription factor 266 338 - -
Lele20g0760 574 Gene3D - 266 340 IPR036638 GO:0046983
Lele20g0760 574 SMART finulus 274 324 IPR011598 GO:0046983
Lele20g0760 574 MobiDBLite consensus disorder prediction 334 359 - -
Lele20g0760 574 Pfam Helix-loop-helix DNA-binding domain 270 319 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0760 Lele-ChrLele20 14535827 14540358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0760 1 530 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 47.473 1.40e-113 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele20g0760 HLH 2.7e-15 No_clan