Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0752 ATGATGAAAATGGACTATGGTGGTGGCTATTCCAGTAATGTGGTTCACCTCTGTGATTCCTGGAGATTGTCCGCTTCCACGCTTTACAGTCACACCGATTCAACTTACCTCTGTTCTTCCTGCGATGGACAAATTCACGCTCTAGGGTCTCCTTGTTGGGCCCACCATCGTGTGGAACTCTGCGGCGCGTGTGAGAAGGCTCCGGTGGCTTTCACCTGCAAGGCTGATGATGCTTCTCTGTGTGTCAACTGTGACTTTGAAATCCACTCTGCCAACCCAATCGCTAGCCGACACAAGAGAGTCCCTGCGTCTCCCCTGTCTCATATACTCAACAACACAGCAGCAACTCCCAATGACCAGCCTAATGACGAGGTTGTAGACAACGACAACGACAACACCGCAAGTAGCAAGGAAATGGACGAGCGAGAAGCTGACTCGTGGTTACTGCTTGATTCTGCTGATACTATAGACAGTCAGGTTGATGATGGGTTTATGTTCAGACAAACAGAGGATGATCCCCATGCGTACGTGGGGCTTGTTGAGGAGTGCGATTCATCCACTAAGTTCAAAAATTTCCAGGAAGATCATGAACAGGGGCAGCAAGCTTACAGTTTTTCTGAAGGGATTAACGAAAGTGACAGTGTTGTGCCAGTTCAATCGGTTGAAGCTCAGCCTAAGAAGCAATTGCAGCCACAGCAGCAGCAGAATATCTACTTCAATATGGAGAAGAAGCCATCAAGATCAGGGGCTTTCACGAATTACGCCTCGAATTGCCGGAGCTTTGGGTTTAATGAAAATCAGGTGGCTGTTCCATATATGGATGCTCAAATGCTGCAAAGAGGGACGACGAGTGGCATGCCAGCAGGGTACAGATTTGCCAAAGGAACAGAGATATTTGGAAGTGCTTCTTCGGTTCAAATGCAAATCCACTTTGGGGAGATGAACAGGAAAGCTGGAGTGGAAAAATACAGAGAGAAGAAGAAATCGAGAAAGTTCGAGAAGAGAATCAGATATGCTTACAGGAAAGCCTACGCTGAGAAACGGCCCAGAGTTAAGGGCAGATTTGTTAAGAGACAAGACTTAACCTCAGTTGAAGCTGTGCCTCTCCATTGA 1113 0.4744 MMKMDYGGGYSSNVVHLCDSWRLSASTLYSHTDSTYLCSSCDGQIHALGSPCWAHHRVELCGACEKAPVAFTCKADDASLCVNCDFEIHSANPIASRHKRVPASPLSHILNNTAATPNDQPNDEVVDNDNDNTASSKEMDEREADSWLLLDSADTIDSQVDDGFMFRQTEDDPHAYVGLVEECDSSTKFKNFQEDHEQGQQAYSFSEGINESDSVVPVQSVEAQPKKQLQPQQQQNIYFNMEKKPSRSGAFTNYASNCRSFGFNENQVAVPYMDAQMLQRGTTSGMPAGYRFAKGTEIFGSASSVQMQIHFGEMNRKAGVEKYREKKKSRKFEKRIRYAYRKAYAEKRPRVKGRFVKRQDLTSVEAVPLH 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0752 370 ProSiteProfiles CCT domain profile. 316 358 IPR010402 GO:0005515
Lele20g0752 370 ProSiteProfiles Zinc finger B-box type profile. 56 103 IPR000315 GO:0008270
Lele20g0752 370 MobiDBLite consensus disorder prediction 109 129 - -
Lele20g0752 370 SMART bboxneu5 56 103 IPR000315 GO:0008270
Lele20g0752 370 Pfam CCT motif 316 358 IPR010402 GO:0005515
Lele20g0752 370 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 18 360 IPR045281 GO:0009909
Lele20g0752 370 MobiDBLite consensus disorder prediction 109 143 - -
Lele20g0752 370 CDD Bbox1_BBX-like 60 102 - -
Lele20g0752 370 Pfam B-box zinc finger 59 102 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0752 Lele-ChrLele20 14486368 14488131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0752 18 358 C2C2-CO-like Transcription Factor Family AT3G02380 39.359 1.67e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele20g0752 zf-B_box 2.4e-06 No_clan