Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0749 ATGGGGAGCGACAGTGAAGCTGAAAAGTCGGTGCAGAAGGAGAAGGAGAAGGAGAAGAAGAAGATGGCGGCCCTGTCTCCGATTGCCAAGCCTCTGGCTGGGAAGAAGCTGTGCAAACGAACTCTTAAACTTGTTCGTCGAGCTTCTGAACACAAGTGCTTAAAGAGAGGAGTAAAGGAAGTGGTTAAAAGTATAAGGCGTGGTCATAAAGGATTATGTGTTATAGCTGGCAATATATCACCAATTGATGTGATAACTCATCTTCCTATCTTATGTGAAGAAGCTGAAATCCCATACATATACGTCCCATCCAAAGAAGACCTTGCAAGTGCAGGAGTGACCAAGAGGCCTACTTGTTGCGTTTTAGTGATGACCAAGCCTGCTAAGGGGGAATTAGATAAAGGGGAACAAGAAAAACTGAAGTCAGATTACGAACAAGTTGTATCAGAAGTTAACGAGGTTACTGCTTCTCTTTTTTGA 480 0.4354 MGSDSEAEKSVQKEKEKEKKKMAALSPIAKPLAGKKLCKRTLKLVRRASEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHLPILCEEAEIPYIYVPSKEDLASAGVTKRPTCCVLVMTKPAKGELDKGEQEKLKSDYEQVVSEVNEVTASLF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0749 159 SUPERFAMILY L30e-like 24 133 IPR029064 -
Lele20g0749 159 MobiDBLite consensus disorder prediction 1 23 - -
Lele20g0749 159 Gene3D - 19 155 IPR029064 -
Lele20g0749 159 FunFam H/ACA ribonucleoprotein complex subunit NHP2 22 154 - -
Lele20g0749 159 PRINTS Ribosomal protein L7A/RS6 family signature 99 113 IPR018492 -
Lele20g0749 159 PRINTS Ribosomal protein L7A/RS6 family signature 54 68 IPR018492 -
Lele20g0749 159 PRINTS Ribosomal protein L7A/RS6 family signature 73 86 IPR018492 -
Lele20g0749 159 PRINTS Ribosomal protein L7A/RS6 family signature 89 99 IPR018492 -
Lele20g0749 159 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 12 149 - -
Lele20g0749 159 PRINTS High mobility group-like nuclear protein signature 40 55 IPR002415 GO:0003723|GO:0005730
Lele20g0749 159 PRINTS High mobility group-like nuclear protein signature 57 67 IPR002415 GO:0003723|GO:0005730
Lele20g0749 159 PRINTS High mobility group-like nuclear protein signature 101 113 IPR002415 GO:0003723|GO:0005730
Lele20g0749 159 PRINTS High mobility group-like nuclear protein signature 27 40 IPR002415 GO:0003723|GO:0005730
Lele20g0749 159 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 42 125 IPR004038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0749 Lele-ChrLele20 14473026 14474351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0749 54 126 Cytoplasmic Ribosomal Protein Gene Family AT2G47610 32.877 3.58e-07 46.6