Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0743 ATGTTTGGTCGTAGAAGAAAGAGGCATAACTTAAGCAAAATCCATGCTTTTTCATGTGGGAAAGCGTCGTTCAATGGGGAGCATTCGCTGATTGGAGGACCTGGGTTTTCGAGAATAGTATATTGCAACGACCCAGAACGAGTTGAGGCGAGTCTTATCAATTATGGTGATAACTACGTTAGAACGACAAAGTACACTTTGGTTTCGTTTCTTCCTAAGTCATTGTTTGAACAATTCAGAAGAGTTGCCAATTTCTTTTTCCTCTTATGTGCAATCCTCGCTTTCTTCCCTGTCTCTCCTTGGGATTCACCTTTCAGCTCTGTTTTCCCTCTGGTGTTTGTTGTTGGTCTTACAATGGCCAAAGAGATTCTTGAGGATTGGAGGAGGAAGAAGCAGGATATTGAGATGAATAACAGAAAGGTCGAAGTACATCATGGGGGAGCTTTTGATTCTACTAAATGGAAGGATCTGAAAGTTGGAGATGTGGTAAAAGTGGAGAAAGATGAATTTTTTCCTGCTGATCTCATCTTACTTTCATCAAGCTACGATGATCCAATTTGCTACGTGGAAACCACAAATCTTGATGGAGAAACAAACCTTAAACTGAAACAAGCATTGGTAGAAACTTCAAAGTTTCAAGAAGATTCAAGCTTTGAAAATTTCAACGCCACTATTGCTTGTGAAGATCCAAATGCAAATTTGTATTCATTTATAGGAACTATGGAGATGGAAAGTCAACAATACCCTCTCACACCTCAGCAACTACTTCTTAGGGACTCTAAACTTAGGAACACAGATTTTATTTATTGTGTGGTAATTTTTACAGGTCATGATACAAAGGTTATGCAGAACTCAACAGAGCCTCCTTCAAAGAGAAGCAACATTGAGAGAAGGATGGACAAAATTGTCTACTTATTGTTCTGTTTGTTATTTGTGATTTCTTTTATTGGGTCTGTTTTCTTTGGGATTTATACAAGTGAAGACCTTGAAAATGGTAAAATGACAAGATGGTACCTTAGACCAGATGAGACTACTATTTTTTATGATTCAAAGAGAGCAGCAATTGCAGCAATGTTGCATTTCTTGACTTTCCTTATGTTGTATGGTTACTTCATTCCCATTTCCCTATATGTGTCGATAGAAATTGTGAAGATCCTTCAGAGTTTTTTCATCAACCAAGACGTGCACATGTATTACGAGGAAACCGACAAGCCAGCGCATGCTCGTACCTCAAATTTGAACGAAGAACTTGGCCAAGTTGATACCATACTTTCTGATAAAACAGGAACTTTGACTTGTAACTCCATGGAATTCATCAAATGTTCCATTGCTGGGGTTGCTTATGGACAAGGAGTTACAGAAGTGGAGAGGGCTCTAGCAAGAAGGAAAGGGTACCTTCTAGAAGAAGAAGAAGATGGCAATGTTGCAGAGATTGCTGAAGCAAAGCCAACTGTTAAAGTATTTAACTTTCTAGATGAAAGGATCATGAATGGGAATTGGGTGAACGAGCCTCACGCAAAAGTAATCCAAAACTTCGTAAGATTGTTGGCTGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAACTGGCAAAGTTTCATATGAAGCTGAATCACCAGATGAAGCAGCATTTGTGATTGCTGCTGGAGAACTTGGGTTTGAGTTCTATGAAAGGACACAGACGGCCATTTTACTGCATGAGTTTTATCCTCTATCTGACAGGAAGGTTGGAAGATCCTACGAACTGTTAAACGTACTAGAGTTTAGCAGTGCAAGAAAGAGGATGTCGGTAATTGTAAGAGACGAGGACGGGAATCTACTACTATTGTGCAAAGGAGCTGACAGTGTCATGTTTGAAAGACTTTCAAAGAATGGAAGAGAGTTTGAAGAGAAAACTCGGGAGCACATTAATGAGTATGCTGACGCTGGTCTGAGGACATTGATACTTGCGTATCGTGAACTTGATGAGAAAGAATACAACCAATTTAACAAAGAATTCAGAGAGGCCAAGAACATAGTGAGTGCGGATCAAGAGCAGATTGTAGAAGAAATAGCAGAGCAGATTGAGAAGGATCTAATTCTTCTTGGTGCTACTGCTGTTGAAGACAAACTTCAAAATGGGGTTCCAGAATGCGTCGACAAGCTTGCACAGGCTGGAATTAAGCTCGGAGTTTTGACTGGTGATAAAATGGAGACAGCAATCAATATTGGATTTGCTTGTAGCTTACTAAGACAAGGAATGAAACAAATTATAATTAGCTCTGAAACTCCAGAAATCAAATCACTGGAGAAATTGGAGGACAAGTCTGCTGCTACTGAGGCAATTAAGGCAAGTGTTCTTTATCAGATACAAGAGGGGAAGGCATCATTATCTACATCAGATGAAAATTCTGAGGCATTTGCTCTGATCATTGATGGCAACTCTCTCACTTATGCGTTGGAAGACAACGCGAAGGACTTGTTTCTTGAACTAGCCATTGGCTGCGCATCTGTCATATGTTGTCGTTCATCTCCCAAACAAAAAGCACTTGTTACGAGGTTAGTTAAGACTAAAACTGGTAGTACAACTCTGGCAATTGGTGATGGAGCAAATGATGTTGGGATGCTCCAAGAAGCCGACATTGGAATCGGTATCAGTGGCGTTGAAGGAATGCAGGCAAGTTGGAAACAATACCACACAGCTGTAATGTCGAGTGACATCGCCATTGCCCAATTTCGGTTCTTAGAGCGCTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGGATCGCATCCATGGTCTGCTACTTCTTCTACAAGAACATTACTTTTGGCTTCACCCTCTTCTTCTTCGAGATATATGCGTCGTTCTCCGGACAGCCAGCCTATAATGATTGGTTTCTATCACTGTATAATGTATTCTTCACATCACTTCCAGTGATTGCCTTAGGAGTGTTCGATCAAGATGTCTCAGCAGAATTATGCGTCAAGTTTCCATTGTTATACCAAGAAGGTGTGCAAAATATTCTGTTCAGTTGGACCAGGATACTTAGTTGGCAATTCAACGGGGTTTTAAGTGCCACTCTGATATTCTTCTTCTGCATCAGTGCACTGGAGAGTCAAGCCTTCCGAAAAGGCGGTGAAGTCGTTGGGCTAGAAATCCTCGGCGCCGCCATGTACACTTGTGTAGTGTGGGTGGTGAATTGCCAAATGGCATTATCAATCAATTACTTCACTTTCATGCAGCATATTTTCATCTGGGGCAGCATCCTATTCTGGTATATATTCCTTCTAGCTTATGGAGCCATGGATCCTACCATATCTACCACTGCTTATAAGGTCTTCATTGAAGTTTGTGCGCCGGCACCTTCTTACTGGCTCGTCACTTTGCTGGTTCTTGTTACATGTCTCATTCCATATTTCGCCTGTGCTTCAATAAAGATGAGGTTTTCCCCCTCATACCATCAAATGATACATTGGATCAGTAACGATGGCCAAGTACATGATCCAGAATATTGTAATGTGGTTCGGTCCAGATCCATACGCCACACGACCGTTGGGTTCACGGCTCGGTTCGAAGCATCCAAACGGTTTGAAGAGAAGTCTGCAGAGAGCATCCCTTAA 3606 0.4118 MFGRRRKRHNLSKIHAFSCGKASFNGEHSLIGGPGFSRIVYCNDPERVEASLINYGDNYVRTTKYTLVSFLPKSLFEQFRRVANFFFLLCAILAFFPVSPWDSPFSSVFPLVFVVGLTMAKEILEDWRRKKQDIEMNNRKVEVHHGGAFDSTKWKDLKVGDVVKVEKDEFFPADLILLSSSYDDPICYVETTNLDGETNLKLKQALVETSKFQEDSSFENFNATIACEDPNANLYSFIGTMEMESQQYPLTPQQLLLRDSKLRNTDFIYCVVIFTGHDTKVMQNSTEPPSKRSNIERRMDKIVYLLFCLLFVISFIGSVFFGIYTSEDLENGKMTRWYLRPDETTIFYDSKRAAIAAMLHFLTFLMLYGYFIPISLYVSIEIVKILQSFFINQDVHMYYEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGQGVTEVERALARRKGYLLEEEEDGNVAEIAEAKPTVKVFNFLDERIMNGNWVNEPHAKVIQNFVRLLAVCHTAIPEVDEETGKVSYEAESPDEAAFVIAAGELGFEFYERTQTAILLHEFYPLSDRKVGRSYELLNVLEFSSARKRMSVIVRDEDGNLLLLCKGADSVMFERLSKNGREFEEKTREHINEYADAGLRTLILAYRELDEKEYNQFNKEFREAKNIVSADQEQIVEEIAEQIEKDLILLGATAVEDKLQNGVPECVDKLAQAGIKLGVLTGDKMETAINIGFACSLLRQGMKQIIISSETPEIKSLEKLEDKSAATEAIKASVLYQIQEGKASLSTSDENSEAFALIIDGNSLTYALEDNAKDLFLELAIGCASVICCRSSPKQKALVTRLVKTKTGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQASWKQYHTAVMSSDIAIAQFRFLERLLLVHGHWCYRRIASMVCYFFYKNITFGFTLFFFEIYASFSGQPAYNDWFLSLYNVFFTSLPVIALGVFDQDVSAELCVKFPLLYQEGVQNILFSWTRILSWQFNGVLSATLIFFFCISALESQAFRKGGEVVGLEILGAAMYTCVVWVVNCQMALSINYFTFMQHIFIWGSILFWYIFLLAYGAMDPTISTTAYKVFIEVCAPAPSYWLVTLLVLVTCLIPYFACASIKMRFSPSYHQMIHWISNDGQVHDPEYCNVVRSRSIRHTTVGFTARFEASKRFEEKSAESIP 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0743 1201 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Lele20g0743 1201 Gene3D - 119 286 - -
Lele20g0743 1201 FunFam Phospholipid-transporting ATPase 117 286 - -
Lele20g0743 1201 SUPERFAMILY HAD-like 419 923 IPR036412 -
Lele20g0743 1201 SUPERFAMILY Calcium ATPase, transmembrane domain M 45 1145 IPR023298 -
Lele20g0743 1201 SUPERFAMILY Calcium ATPase, transduction domain A 138 284 IPR008250 -
Lele20g0743 1201 Coils Coil 117 144 - -
Lele20g0743 1201 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 29 1157 - -
Lele20g0743 1201 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 826 950 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0743 1201 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 215 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele20g0743 1201 CDD P-type_ATPase_APLT_Dnf-like 57 1028 - -
Lele20g0743 1201 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 698 IPR023299 GO:0000166
Lele20g0743 1201 Gene3D - 535 696 IPR023299 GO:0000166
Lele20g0743 1201 SFLD p-type atpase 406 919 IPR044492 -
Lele20g0743 1201 Pfam Phospholipid-translocating ATPase N-terminal 40 101 IPR032631 -
Lele20g0743 1201 FunFam Phospholipid-transporting ATPase 538 696 - -
Lele20g0743 1201 Pfam Phospholipid-translocating P-type ATPase C-terminal 896 1147 IPR032630 -
Lele20g0743 1201 FunFam Phospholipid-transporting ATPase 696 908 - -
Lele20g0743 1201 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1152 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Lele20g0743 1201 SFLD C1.7: P-type atpase like 406 919 - -
Lele20g0743 1201 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Lele20g0743 1201 PRINTS P-type cation-transporting ATPase superfamily signature 860 879 - -
Lele20g0743 1201 Pfam E1-E2 ATPase 136 327 - -
Lele20g0743 1201 Pfam Cation transport ATPase (P-type) 519 623 - -
Lele20g0743 1201 Gene3D - 697 908 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0743 Lele-ChrLele20 14436580 14441624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0743 10 1191 Primary Pumps ATPases AT1G68710 68.724 0.0 1738