Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0738 ATGGGTATTACGTTGAAGAGCTGTTTGGTTTGTGTAGCTGTTTTGTGTTGGTTCAACGCGTTGATGGTGAGCAGCACAGAGTTTGAAGTTGGTGGCAACAATGGCTGGGCGATTCCTAAGTCTGAGGATTACTACAACAACTGGGCTTCCGAAAACAGATTCATCGTTCATGATACCCTCCGTTTCAAGTATGATAAAGATTCGGTGATAGAGGTGAACGAAGAAGACTACAACAAATGCAAGGCGTCGCGTCCTCTGTTCTTCTCCAACACTGGCGACACCGTCTTCACATTTGATAGGCCCGGCTTGTTCTTCTTCATTAGTGGTGTTTCTGGTCACTGTGACAGAGGCCAAAAGCTCGTCGTCAAGGTATTGGACGTTCAGGCCCACTCGCCACCACCCCAAAGCCAAAACGACGACCACAATTCTCCCCAGAAAGGAGCTGCTTCTTCTTCTGCCAAAACGACATCAGCTCTTGTCCTTGTCTCGTCGTTCATCCTCCTGCTTCTTGCTTGA 516 0.4826 MGITLKSCLVCVAVLCWFNALMVSSTEFEVGGNNGWAIPKSEDYYNNWASENRFIVHDTLRFKYDKDSVIEVNEEDYNKCKASRPLFFSNTGDTVFTFDRPGLFFFISGVSGHCDRGQKLVVKVLDVQAHSPPPQSQNDDHNSPQKGAASSSAKTTSALVLVSSFILLLLA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0738 171 Gene3D - 25 130 IPR008972 -
Lele20g0738 171 ProSiteProfiles Phytocyanin domain profile. 26 126 IPR003245 GO:0009055
Lele20g0738 171 PANTHER BLUE COPPER PROTEIN 24 148 IPR039391 GO:0009055
Lele20g0738 171 SUPERFAMILY Cupredoxins 25 125 IPR008972 -
Lele20g0738 171 CDD OsENODL1_like 26 125 IPR041846 -
Lele20g0738 171 FunFam Early nodulin-like protein 1 25 129 - -
Lele20g0738 171 MobiDBLite consensus disorder prediction 130 151 - -
Lele20g0738 171 Pfam Plastocyanin-like domain 36 118 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0738 Lele-ChrLele20 14396201 14396819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0738 6 125 Phytocyanin Superfamily AT3G18590 59.350 1.13e-51 162