Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0722 ATGATTGCCTTCTTCGTCCCGCTGCTGCTGCTGAGTGTTCGAGTCAGTACGGAGCCGACTCAGGACAAGCAAGCCCTCCTTGCCTTCATCTCTCAGACCCCACATGCCAATCGCGTCCAATGGAACGCTTCCGTCTCCGCCTGCAACTGGTTTGGGGTCGAATGTGATGTTTCTCGTTCCTTTGTCTTCACTCTTCGTCTGCCCGGCGTTGGCCTCTTGGGCGGGATTCCTCCCAACACTATCGGTCGTCTCACTCAGCTACGAGTTCTCAGTCTCCGCTCTAATGGTCTCACCGGCGAGCTCCCCGCTGATTTCTCTAATTTGACGTTGCTTCGTAACTTGTACCTCCAGGATAACAAGTTCTCCGGTGGGTTCCCTTCGTCTCTCACTCAGTTGGGTCGTTTGACGCGCTTGGATCTCTCGTCCAACAATTTTACGGGTCCAATCCCTTTCTCAATCAACAATTTGACCCACTTGACCGGTCTATTCTTGCAAAGTAATGGATTCTCGGGCAATCTACCGAGCGTGAGTGCCAAATTGGCAGGCTTCAATGTTTCTAATAATCAGCTTAATGGTTCGATCCCCAAATCTCTCTCGAATTTTCCTGCATCCTCATTTGCCGGAAACTTAGATCTCTGCGGTGGGCCATTGCCGCCATGTACCCCATTCTTCCCGTCTCCGGCTCCGTCGCCTTCCGCCCCCGTCGTGCCCTCTTCCCCAGCTCACAAAAAGTCCAAGAAACTCTCAAAAGGTGCCATTATAGGAATTGCAGTTGGGTGCTCTCTCGCGGCTTTGTTACTGCTGCTTCTGCTTCTCCTCTGCCTGGGCAAACACCGACGAACCCAGCCAGCGAAGCAGCCGAAGCCCGTGGTGGCGACGCGTGCTGCGCCGGCGGAAGCCGGAACATCGTCTTCAAAAGACGATATCACAGGTGGGTCCGTGGAGGCAGAGAGGAACAAGTTAGTGTTCTTCGAAGGGGGGATATACAGCTTCGATTTGGAAGATCTGTTGAGAGCTTCCGCCGAAGTTCTGGGCAAAGGAAACGTCGGAACATCGTACAAGGCGGTGCTGGAGGAAGGAACTACAGTGGTAGTGAAGAGATTAAAAGACGTCGCGGTAACAAAGAAAGACTTCGATGCTCAAATGGAAGTTCTGGGCAAGATTAAACACGAGAATGTGGTTCCTCTCAGAGCTTACTATTACTCCAAAGATGAGAAATTACTCGTCTACGATTACCTCCCTTCTGGTAGCTTGTCTGCTCTGCTCCACGGTAGTAGAGGGTCAGGGAGGACGCCACTTGACTGGGATAGCCGAAGGAGGATAGCTCTAGGTGCCGCTAGGGGGTTGCTTCACCTACACGTGTCAGGAAAAGTGATCCACGGCAACATAAAAGCCTCCAACGTACTCCTTCGAGGAAACGACAATGAGGCCTGCGTTTCGGACTTCGGTCTCAACCCATTGTTCGCCAACACCACCCCATCCAACCGGGTGGCGGGATATCGGGCACCCGAAGTGCTCGAAACCCGGAAAGTCACTTTCAAATCCGACGTGTACAGCCTTGGTGTTCTGCTGCTGGAGCTCCTCACCGGGAAGGCGCCGAACCAGGCGTCGCTGGGCGAGGAGGGGATTGACCTTCCGAGATGGGTTCAGTCGGTGGTCCGAGAAGAATGGACGGCGGAGGTGTTCGACGCGGAGCTCATGAGGTACCACAATATAGAGGAAGAGATGGTTCAGCTGTTGCAGATAGCCATGGCGTGCGTGTCGGTGGTTCCCGATCAGAGACCCACCATGCAGGAGGTGGTCCGGATGATGGAGGAGATCAACAGGAGCGAGACAGACGAGGGGTTGCGGCAGTCGTCGGACGATCCATCGAAGGGATCGGACGGTCAAACGCCGCCGGCAGAATCAAGAACTCCGCCCAGATCAAGCACGCCTTGA 1938 0.5428 MIAFFVPLLLLSVRVSTEPTQDKQALLAFISQTPHANRVQWNASVSACNWFGVECDVSRSFVFTLRLPGVGLLGGIPPNTIGRLTQLRVLSLRSNGLTGELPADFSNLTLLRNLYLQDNKFSGGFPSSLTQLGRLTRLDLSSNNFTGPIPFSINNLTHLTGLFLQSNGFSGNLPSVSAKLAGFNVSNNQLNGSIPKSLSNFPASSFAGNLDLCGGPLPPCTPFFPSPAPSPSAPVVPSSPAHKKSKKLSKGAIIGIAVGCSLAALLLLLLLLLCLGKHRRTQPAKQPKPVVATRAAPAEAGTSSSKDDITGGSVEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGNVGTSYKAVLEEGTTVVVKRLKDVAVTKKDFDAQMEVLGKIKHENVVPLRAYYYSKDEKLLVYDYLPSGSLSALLHGSRGSGRTPLDWDSRRRIALGAARGLLHLHVSGKVIHGNIKASNVLLRGNDNEACVSDFGLNPLFANTTPSNRVAGYRAPEVLETRKVTFKSDVYSLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMACVSVVPDQRPTMQEVVRMMEEINRSETDEGLRQSSDDPSKGSDGQTPPAESRTPPRSSTP 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0722 645 MobiDBLite consensus disorder prediction 622 645 - -
Lele20g0722 645 Pfam Protein kinase domain 341 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0722 645 SUPERFAMILY Protein kinase-like (PK-like) 342 609 IPR011009 -
Lele20g0722 645 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 413 618 - -
Lele20g0722 645 FunFam pollen receptor-like kinase 1 308 412 - -
Lele20g0722 645 Gene3D Phosphorylase Kinase; domain 1 306 412 - -
Lele20g0722 645 MobiDBLite consensus disorder prediction 606 645 - -
Lele20g0722 645 Gene3D Ribonuclease Inhibitor 180 220 IPR032675 -
Lele20g0722 645 Gene3D Transferase(Phosphotransferase) domain 1 413 627 - -
Lele20g0722 645 Pfam Leucine rich repeat 73 121 IPR001611 GO:0005515
Lele20g0722 645 MobiDBLite consensus disorder prediction 606 621 - -
Lele20g0722 645 PANTHER OS05G0588300 PROTEIN 5 617 - -
Lele20g0722 645 Gene3D Ribonuclease Inhibitor 19 177 IPR032675 -
Lele20g0722 645 FunFam Probable inactive receptor kinase RLK902 19 177 - -
Lele20g0722 645 ProSiteProfiles Protein kinase domain profile. 338 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g0722 645 MobiDBLite consensus disorder prediction 283 311 - -
Lele20g0722 645 SUPERFAMILY L domain-like 22 201 - -
Lele20g0722 645 Pfam Leucine rich repeat N-terminal domain 20 56 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0722 Lele-ChrLele20 14252243 14254949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0722 22 628 Receptor kinase-like Gene Family AT5G58300 55.935 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele20g0722 Pkinase 1e-38 CL0016