Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0709 ATGGTGGGGGATCTTCACGCTTTGGGCATGACTTTTTCACCGGCTATTCCTGTGGTCCATTCCTCCTGTCCGTTACGGGGAGCTATGGGGCATGGAGCTGTTTACGAAAATAGCCTTCCGCGTCACAGACGTAATGTCGGACACGGCGTATGGGAAATTGGTTTGGGCCTGAATGGGCCGAAAAGGCACATGAGACAAGCACGTGATAGCGTGGCAGTGAGGAAGCAACGACAGATGGGTTTGTCGTTTTGTGAAGGAGGTAGGGAAAGAGGGCTGAATTCAAAGGAAGGTTTGAAATTGAGTCACTTAGCCGAAGGGAGTTTTCTGATGTGGGCTCCATGTGCTTGTCTCATAGTAACCGAGATGAAAGCAGAGTATTTCCCCCCGAAAGAAGATGTTATCTTGCAGAACGAAGAACAAACTGATCTTTATATATTAGTCACTGGGAACTTTAAAGATCTACTTGAGATTGGAGCTAATAGATTTGGTATCACTCCTGCTAGGATTCTTAGCAGGGATGGAGCTGAAATTGATGGTGTAGATGTGATTAGAGATGGTGATCATCTTTTGTTTGTCAGTTCGGAAAAGATCTGA 594 0.4596 MVGDLHALGMTFSPAIPVVHSSCPLRGAMGHGAVYENSLPRHRRNVGHGVWEIGLGLNGPKRHMRQARDSVAVRKQRQMGLSFCEGGRERGLNSKEGLKLSHLAEGSFLMWAPCACLIVTEMKAEYFPPKEDVILQNEEQTDLYILVTGNFKDLLEIGANRFGITPARILSRDGAEIDGVDVIRDGDHLLFVSSEKI 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0709 197 ProSiteProfiles cAMP/cGMP binding motif profile. 118 152 IPR000595 -
Lele20g0709 197 Pfam KHA, dimerisation domain of potassium ion channel 139 191 IPR021789 -
Lele20g0709 197 PANTHER POTASSIUM CHANNEL AKT1 118 150 IPR045319 GO:0005249|GO:0006813
Lele20g0709 197 ProSiteProfiles KHA domain profile. 123 197 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0709 Lele-ChrLele20 14175457 14178353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0709 145 193 Ion Channels AT2G26650 56.000 3.88e-13 65.5