Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0704 ATGGGCAGCTCAGCCGGCGCCGCCGTTGATGGACGTACTCCTCCTGTGGACAAGGGCGTCGATTATGCTAATTACTTTTGCACCTATGCTTTTTTATACCACCAGAAGGACATGCTCTCTGATCGGGTTCGCATGGACGCTTACTTCAATGCTATTTTTCAGAACAAGCATCACTTCAGTGGCAAGACTGTTTTGGATGTGGGAACTGGAAGTGGCATTCTTGCGATATGGTCAGCACAGGCCGGGGCAAGGAAAGTATATGCAGTTGAAGCGACTAAGATGGCAGAATATGCTCGTAATCTTGTCAAAGCAAATAATCTTCAACATGTGGTCGAAGTAATTGAAGGCTCAATGGAAGATATAACTTTGCCGGAGAAAGTTGACGTGATAATCTCTGAGTGGATGGGATATTTTCTTCTGCGTGAATCTATGTTTGATTCAGTAATATGTGCTCGTGACCGCTGGCTCAAACCAACAGGTGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCCATTAGGACTGGGATTGTAGATCACAAAATGGGTGAGTACCATTCAGCTATGGATGATTGGCACAACTTTGTTGATGAAACAAATACATATTATGGCGTTGATATGAGTGCTCTAACAAAGCCTTTTTCTGAGGAGCAGAGGAAATACTATCTACAGACATCAACGTGGAACAACCTTCAACCAAACCAAGTTATAGGGACAGCTTCTGTAATAAAGGAGATTGATTGTTTAACTGCTACTGTGGCTGATATAAAGGAAGTTAGATCAATATTTTCTTCGTCAATAACCTCAGAAAACACAAAGCTTTGTGGGTTTGGAGGGTGGTTTGATGTTCATTTTCGGGGAAGAGTTGAAGATCCAGCTGAACAGGAGATTGAGTTAACAACAGCTCCTAGTGTAGATAATGGCACTCACTGGGGTCAACAGGTTTTCCTACTGCATCCTACTCTCCATGTCAGTGAAGGCGATCATTTAAGCATTTCTTTCTTCATGGATCGCTCAAAGGAAAACCATCGTTTGATGGAGGTTGATTTTGAGTGTGACATTCAACAGCATCCTGGCAAGCATCTTAAATCTTTCAAAAGTAAGTATTACATCGAATGA 1122 0.4269 MGSSAGAAVDGRTPPVDKGVDYANYFCTYAFLYHQKDMLSDRVRMDAYFNAIFQNKHHFSGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMAEYARNLVKANNLQHVVEVIEGSMEDITLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWMAPIRTGIVDHKMGEYHSAMDDWHNFVDETNTYYGVDMSALTKPFSEEQRKYYLQTSTWNNLQPNQVIGTASVIKEIDCLTATVADIKEVRSIFSSSITSENTKLCGFGGWFDVHFRGRVEDPAEQEIELTTAPSVDNGTHWGQQVFLLHPTLHVSEGDHLSISFFMDRSKENHRLMEVDFECDIQQHPGKHLKSFKSKYYIE 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0704 373 FunFam Protein arginine N-methyltransferase PRMT10 19 164 - -
Lele20g0704 373 FunFam Protein arginine N-methyltransferase PRMT10 166 373 - -
Lele20g0704 373 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Lele20g0704 373 Gene3D Vaccinia Virus protein VP39 20 164 IPR029063 -
Lele20g0704 373 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 350 IPR025799 GO:0016274|GO:0018216
Lele20g0704 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 22 358 IPR025799 GO:0016274|GO:0018216
Lele20g0704 373 CDD AdoMet_MTases 63 163 - -
Lele20g0704 373 Gene3D - 166 373 - -
Lele20g0704 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 357 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0704 Lele-ChrLele20 14130609 14133380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0704 24 332 C2H2 Transcription Factor Family AT3G12270 33.739 9.19e-42 152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0810 17 19564961 19567804 Lele20g0704 20 14130609 14133380 hybridization
Lele18g0714 18 4367153 4369995 Lele20g0704 20 14130609 14133380 hybridization